Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g3408 ATGGCCTCAGCATCAGCATCAGCAACTCTTCTTAAGCCATCTTCACCAGTTCTTGACAAGTCTGAGTGGGTTAAGGGCCAAACACTTCGCCAAACTTCTGTTGCTGTTGCAAGGAGCACCACCACCTCCTCTTCACCACTCACCATCAGAGCTGGCTCCTATGCTGATGAGCTCGTTAAGACCGCGAAAACAGTTGCTTCACCGGGGCGTGGTATTTTGGCCATGGATGAGTCAAACGCTACCTGTGGGAAGCGTTTGGCCTCAATTGGGCTTGAGAACACTGAGGCTAACCGCCAGGCATACAGAACCCTCCTTGTGACAGCACCAGGACTTGGTCAGTACATCTCTGGTGCCATCCTCTTTGAGGAAACTCTCTACCAATCCACAGTTGATGGCAAGAAGATTGTCGATGTACTTAAGGAGCAGAACATTGTTCCTGGTATCAAGGTCGACAAGGGTTTGGTTCCCTTGGCTGGTTCCAACGACGAATCATGGTGCCAAGGTTTGGATGGTCTTGCCTCTCGCTCTGCTGCATACTACCAGCAAGGTGCTCGTTTCGCCAAATGGCGTACCGTTGTGAGCATCCCAAATGGTCCCTCTGCTCTGGCAGTTAAGGAAGCAGCATGGGGTTTGGCTCGCTATGCTGCCATTTCTCAGGACAATGGATTGGTCCCAATTGTGGAGCCAGAGATCTTGCTTGATGGTGAACACAACATCGATAGGACTTTTGAGGTTGCTAAGAAGGTCTGGGCTGAGGTTTTCTTCTACCTTGCTGAGAACAATGTCCTCTTTGAAGGTATTCTCCTCAAGCCTAGCATGGTTACTCCCGGTGCCGAGTCGAAGGACAGGGCCTCTCCTCAGCAGGTTGCTGACTACACACTCAAGCTCCTTCACAACAGAATTCCACCTGCTGTCCCTGGAATTATGTTCTTGTCTGGTGGACAATCTGAGGTTGAAGCAACACTGAACTTGAATGCAATGAACCAATCTCCAAACCCGTGGCACGTGTCATTCTCGTATGCCAGAGCCCTCCAAAACACCTGCCTGAAGACATGGGGAGGCCGCCCGGAGAACGTGAAGGCTGCACAAGATGCACTGCTCTTCCGTGCCAAGTCCAACTCGCTCGCACAGCTTGGGAAGTACACCGCCGACGGCGAATCTGAGGAAGCCAAGAAGGAGTTGTTCGTCAAGGGATACTCCTACTAA 1206 0.5149 MASASASATLLKPSSPVLDKSEWVKGQTLRQTSVAVARSTTTSSSPLTIRAGSYADELVKTAKTVASPGRGILAMDESNATCGKRLASIGLENTEANRQAYRTLLVTAPGLGQYISGAILFEETLYQSTVDGKKIVDVLKEQNIVPGIKVDKGLVPLAGSNDESWCQGLDGLASRSAAYYQQGARFAKWRTVVSIPNGPSALAVKEAAWGLARYAAISQDNGLVPIVEPEILLDGEHNIDRTFEVAKKVWAEVFFYLAENNVLFEGILLKPSMVTPGAESKDRASPQQVADYTLKLLHNRIPPAVPGIMFLSGGQSEVEATLNLNAMNQSPNPWHVSFSYARALQNTCLKTWGGRPENVKAAQDALLFRAKSNSLAQLGKYTADGESEEAKKELFVKGYSY* 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g3408 401 CDD FBP_aldolase_I_a 55 381 - -
Aev04g3408 401 SUPERFAMILY Aldolase 48 401 - -
Aev04g3408 401 Gene3D Aldolase class I 35 400 IPR013785 -
Aev04g3408 401 PANTHER FRUCTOSE-BISPHOSPHATE ALDOLASE 38 401 IPR000741 GO:0004332|GO:0006096
Aev04g3408 401 Pfam Fructose-bisphosphate aldolase class-I 57 401 IPR000741 GO:0004332|GO:0006096
Aev04g3408 401 ProSitePatterns Fructose-bisphosphate aldolase class-I active site. 262 272 IPR029768 -
Aev04g3408 401 PANTHER FRUCTOSE-BISPHOSPHATE ALDOLASE 38 401 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g3408 Aev-Chr4 32711726 32714045 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev04g3408 54 401 Miscellaneous Gene Families AT3G52930 56.250 3.13e-136 392
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g3408 K01623 - gmx:100818915 721.079
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev04g3408 04 32711726 32714045 Aev04g3408 04 32711726 32714045 ECH