Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g3407 ATGAAGAAGAAGCTCCTGTTCGATTTCCATTTGCATTCCCAATTTGGCGTGTTCTTCTTGGTGTTCCTAATAATGGGACTTCCAAATGAGGGAAGAAGCTCACACGACTACGAAGACGCATTATCGAAGGCAATAATGTTCTTCGAGGGACAGAGGTCAGGGTTCCTGCCTCAGGACCAGAGGATGACCTGGCGGGCCAACTCCGGCCTCAGCGACGGCTGGACCTACAATACGGATCTCACCGGCGGCTACTACGACGCCGGCGACAACATCAAGTTCGGGTTTCCGATGGCATTCACCACCACAATGCTTGCTTGGAGCGTCCTCGAATTTGGGGGAATGATGCCGCCGAACGAGCTCAGGAACGCTTTGGTTGCGATTCGTTGGGCCACTGATTACTTGCTCAAGACTGTTTCTCAGCCCAACCGGATTTTCGTTCAGGTTGGTGATCCTAGCTCGGACCACGATTGTTGGGAGAGGCCAGAGGACATGGACACAGCAAGGACTGTTTATGCCGTCGATGCACCTAATGCGGCTTCCGATGTCGCCGGCGAAACAGCCGCTGCGCTGGCAGCCTCATCCTTGGCATTCTGGTCAAGTGATCCAGGTTATGCAGAGACATTACTACGAAATGCTATTAGTGCCTTCCAATTTGCAGATAACTACAGGGGAGCTTACAGTGATAATGCTAATGTAAAGTATGGTGCTTGCCCATATTATTGTGATTTTGATGGCTATCAGGACGAGTTGTTGTGGGGAGCAGCATGGCTAAGGAGGGCGACGAAGGACGATAATTACCTAAACTACCTCCAAAGCAATGGAAAAACACTTGGTGCTGACGATAATATCAATGAATTTGGATGGGACAACAAGCACGCTGGCCTCAATGTTCTTGTCTCCAAGGAGGTGATGGAAGGAAACACATACTCTCTTGAATCCTACAAGGATTCAGCAGAGAGCTTCATGTGCACACTCATACCCGAATCACCAAGTTCACACATAGAGTACACCCCTGGTGGACTCATATACAGGCCAGGAGGTAGCAACTTGCAACACGCAACTTCAATCTCTTTCCTTCAATTAGTATATGCCAATTACTTGGACAGCAAGTCACAAAATCTCAGTTGTGGAAACGTCTATGTTAGTGCACAAACACTTAGACAGCATGCTAAGAGGCAAGTTGATTACATTTTGGGCGATAATCCCATGGGACTATCGTACATGGTTGGTTATAGCAACTATTATCCGCAGCGAATTCATCACCGCGGATCTTCCTTACCTTCCATCAAGGATCATCCTCAATTTATTGCGTGCAAAGAAGGTTCGATGTACTACAACTCGACGATTCCTAATCCTAATGTGCTTGTGGGGGCAATTGTTGGAGGACCAGGGGAAGATGATGTTTATGTGGATGATAGGGATGATTTTAGAAAATCCGAACCAACCACATACATTAATGCACCTTTTGTTGGGGTTCTAGCATATTTTACTGCTAATCCCAACTTTAGTTAA 1512 0.4722 MKKKLLFDFHLHSQFGVFFLVFLIMGLPNEGRSSHDYEDALSKAIMFFEGQRSGFLPQDQRMTWRANSGLSDGWTYNTDLTGGYYDAGDNIKFGFPMAFTTTMLAWSVLEFGGMMPPNELRNALVAIRWATDYLLKTVSQPNRIFVQVGDPSSDHDCWERPEDMDTARTVYAVDAPNAASDVAGETAAALAASSLAFWSSDPGYAETLLRNAISAFQFADNYRGAYSDNANVKYGACPYYCDFDGYQDELLWGAAWLRRATKDDNYLNYLQSNGKTLGADDNINEFGWDNKHAGLNVLVSKEVMEGNTYSLESYKDSAESFMCTLIPESPSSHIEYTPGGLIYRPGGSNLQHATSISFLQLVYANYLDSKSQNLSCGNVYVSAQTLRQHAKRQVDYILGDNPMGLSYMVGYSNYYPQRIHHRGSSLPSIKDHPQFIACKEGSMYYNSTIPNPNVLVGAIVGGPGEDDVYVDDRDDFRKSEPTTYINAPFVGVLAYFTANPNFS* 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g3407 503 Pfam Glycosyl hydrolase family 9 37 493 IPR001701 GO:0004553|GO:0005975
Aev04g3407 503 PANTHER ENDOGLUCANASE 24 17 502 - -
Aev04g3407 503 SUPERFAMILY Six-hairpin glycosidases 34 499 IPR008928 GO:0005975
Aev04g3407 503 ProSitePatterns Glycosyl hydrolases family 9 (GH9) active site signature 2. 396 422 IPR018221 -
Aev04g3407 503 ProSitePatterns Glycosyl hydrolases family 9 (GH9) active site signature 3. 469 487 IPR033126 -
Aev04g3407 503 PANTHER ENDO-1,4-BETA-GLUCANASE 17 502 - -
Aev04g3407 503 Gene3D - 33 499 IPR012341 GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g3407 Aev-Chr4 32704905 32709698 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev04g3407 15 499 Glycoside Hydrolase AT1G70710 58.557 0.0 589
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g3407 K01179 - gmx:100101849 890.567
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev04g3407 04 32704905 32709698 Aev04g3407 04 32704905 32709698 ECH