Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g3401 ATGGATGCTATCAGAAAACAAGCTTCAAAGCTTCGTGAACAAGTCGCTCGCCAACAACATGCTGTTCTGAAACAGTGGGGATATGGAGGTTCAGATAATGTGGTTGCCGATGAGGCAGAGCTCCAGCTACATCAGAGACTTGAGAAACTTTATATATCAACTCGTGCGGGAAAGCATTACCAAAGGGATATTGTCCGTGGTGTTGAAGGTTATATTGTTACTGGATCCAAGCAAGTTGAAATTGGAACAAAGTTGTCTGAAGATAGTCGGAAATACGGAGCAGAAAATACATGTACCAGTGGTAGTACATTGTCTCGAGCTGCACTAAGTTACTCACGTGCTCGTGCTCAAATGGAGAAGGAACGTGGAAACTTACTGAAAGCTCTTGGTACACAGGTTGCAGAGCCCTTAAGAGCTATGGTGGTGGGAGCTCCATTGGAGGATGCTCGGCATCTAGCTCAACGTTATGACAGAATGCGACAGGAAGCTGAAGCCCAGGCTATTGAAGTTTCTAAACGCCATGCAAGAGTAAGAGAAACACCAGGCAATGCTGACAGTGCTATGAAATTAGAAGCAGCTGAAGCAAAGCTGCACGACCTGAAGTCAAACATGGCCATATTGGGGAAGGAAGCGGCTGCAGCATTGGCTGCTGTTGAAGCACAGCAACAGAGGTTAACCCTTCAGCGCCTTATAGCTATGGTTGAAGCAGAGCGTGCCTATCATCAGATAGTTCTTCAAATACTAGATCAGCTTGAGGGAGATATGATATCAGAACGACAACGAATTGAAGCCCCTCCTACTCCTAGTGTGGATCACAGCATGCCACCTCCTCCATCATATGAGGAAGCGAATGGTGTCTATGCTTCCCAGGCAAATAATGGATCAACAGATAGCATGGGTTACTTCTTAGGAGAGGTTATGTTTCCATACTCTGCTGTGTCTGACGTGGAGTTGAATCTATCAGTTGGAGATTATGTTGTTGTACGAAAGGTGACAAACAACGGTTGGGCAGAGGGTGAATGCAAAGGGAAAGCAGGTTGGTTTCCATTCAGTTACATTGAAAGAAGGGAGCGGGTTCTTGCAAGCAAGGTGGCCGAAGTGTTCTAA 1107 0.4598 MDAIRKQASKLREQVARQQHAVLKQWGYGGSDNVVADEAELQLHQRLEKLYISTRAGKHYQRDIVRGVEGYIVTGSKQVEIGTKLSEDSRKYGAENTCTSGSTLSRAALSYSRARAQMEKERGNLLKALGTQVAEPLRAMVVGAPLEDARHLAQRYDRMRQEAEAQAIEVSKRHARVRETPGNADSAMKLEAAEAKLHDLKSNMAILGKEAAAALAAVEAQQQRLTLQRLIAMVEAERAYHQIVLQILDQLEGDMISERQRIEAPPTPSVDHSMPPPPSYEEANGVYASQANNGSTDSMGYFLGEVMFPYSAVSDVELNLSVGDYVVVRKVTNNGWAEGECKGKAGWFPFSYIERRERVLASKVAEVF* 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g3401 368 ProSiteProfiles Src homology 3 (SH3) domain profile. 299 358 IPR001452 GO:0005515
Aev04g3401 368 Coils Coil 1 21 - -
Aev04g3401 368 Coils Coil 146 173 - -
Aev04g3401 368 MobiDBLite consensus disorder prediction 262 283 - -
Aev04g3401 368 Gene3D SH3 Domains 299 358 - -
Aev04g3401 368 SUPERFAMILY SH3-domain 261 356 IPR036028 GO:0005515
Aev04g3401 368 Coils Coil 183 210 - -
Aev04g3401 368 Gene3D Arfaptin homology (AH) domain/BAR domain 42 264 IPR027267 -
Aev04g3401 368 SUPERFAMILY BAR/IMD domain-like 42 255 IPR027267 -
Aev04g3401 368 SMART SH3_2 302 357 IPR001452 GO:0005515
Aev04g3401 368 Pfam Variant SH3 domain 306 354 IPR001452 GO:0005515
Aev04g3401 368 PANTHER SH3 DOMAIN-CONTAINING 1 368 - -
Aev04g3401 368 Coils Coil 217 237 - -
Aev04g3401 368 PANTHER PROTEIN, PUTATIVE-RELATED 1 368 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g3401 Aev-Chr4 32672108 32675692 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g3401 - - gmx:100783004 640.188
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev04g3401 04 32672108 32675692 Aev04g3401 04 32672108 32675692 ECH