LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Aev04g3394	ATGATAGGAGCAATTTCAAGCACATCTTGGTCATCAATCCAAAACTTTGGAAATGGGTTATGTACTAAGGTAAGAAAACCAATGGCAGTATCTATGTCTCTCGGAGATAATAACAAGAAGAACTCAGAAATGGGTGTTGGAGGAAGTGAAAGGCTCTATCTGGGGTTGGACTTTGGAACTTCTGGTGCCAGGTTTGCCATCATTGATAAATGTGGCACTATTCAGGCTGAGGCCAAGAGAGAGTATCCTCAGTACAAGAGTGGAGAATCAAATGATTGGGTACGCTCGTGGAGGGAGACACTGTTTTTGCTGCTCGAAGATGTCCCGCCTGAGCTTTGCAAACAAATTGTGTCCATTTCTATTGATGGCACTTCTGCTACTACTATCATTGTTGATAGTGACACTGGTGAACCAATATGGAGACCTTTACTTTACAATGAGAGTTGTCCTGATGCACTTCCAATGGTGAAATCTATTGCTCCTCCAAACCATACGGTTTGCACCGGATCATCCACTCTCTGTAAGCTCGTCTCGTGGTGGAACAATGTCGGCTCAAACAAGAAATCAGCTCTGTTGTTGCACCAAGCAGATTGGCTTTTGTGGCTTCTTCATGGGAAGCTTGGAGTTTCAGACTACAATAATGCTCTGAAGGTTGGTTATGATCCTGAGATTGATGCATATCCAGCATGGCTGGTCTCTCAACCATATTCTCATCTTTTACCTTCAGTTCTTGCTCCAGGAACTCCAATTGCTTCTTTAAAGGAGGAAATTAGGAATAAATTCCGTTTTGAAAAGGATTGTGTTGTATGCACTGGAACAACTGACAGCATAGCTGCATTTCTTGCAGCTCGTGCCAATCTACCTGGAAAAGCAGTTACTTCTTTGGGTTCAACACTTGCTATAAAACTATTGAGCAACACAAGAATTGAGGATTCTCGGTTCGGGGTTTATAGCCATCGCCTCGACGATAAATGGCTTGTTGGTGGTGCTTCAAACACTGGTGGAGCAGTTCTTAGACAGATTTTCACTGATGATCAATTAGAGAAACTCAGTGAACAGATCAATCCCTCACAAGCCTCTCAGCTAGACTACTATCCTCTTCCAAAACCTGGTGAGAGATTTCCAGTGGCTGATCCAAACTTGCCTCCAAGGCTACTCCCACGTCCAGAAGATGATGCTGAGTACTTGCATGGGATCTTGGAATCCATTGCTCGGATAGAGGGTAAAGCATATGGGTTGCTAAAGGAGCTAGGAGCAACAGAGGTGGATGAAGTGTTCACAGCTGGTGGAGGATCCAAAAATGACAAGTGGACAAAGATTCGAGAGAGGGTTCTTGGTTTGCCTGTTACTCGTGCTGATCAAACAGAGGCTGCATATGGAGCTGCATTATTGGCTATAAAGGGTCATCAACTAAATAATAAATATTAA	1428	0.4356	MIGAISSTSWSSIQNFGNGLCTKVRKPMAVSMSLGDNNKKNSEMGVGGSERLYLGLDFGTSGARFAIIDKCGTIQAEAKREYPQYKSGESNDWVRSWRETLFLLLEDVPPELCKQIVSISIDGTSATTIIVDSDTGEPIWRPLLYNESCPDALPMVKSIAPPNHTVCTGSSTLCKLVSWWNNVGSNKKSALLLHQADWLLWLLHGKLGVSDYNNALKVGYDPEIDAYPAWLVSQPYSHLLPSVLAPGTPIASLKEEIRNKFRFEKDCVVCTGTTDSIAAFLAARANLPGKAVTSLGSTLAIKLLSNTRIEDSRFGVYSHRLDDKWLVGGASNTGGAVLRQIFTDDQLEKLSEQINPSQASQLDYYPLPKPGERFPVADPNLPPRLLPRPEDDAEYLHGILESIARIEGKAYGLLKELGATEVDEVFTAGGGSKNDKWTKIRERVLGLPVTRADQTEAAYGAALLAIKGHQLNNKY*	476

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Aev04g3394	475	Gene3D	-	279	475	-	-
	Aev04g3394	475	PANTHER	SUGAR KINASE	50	470	-	-
	Aev04g3394	475	Gene3D	-	49	278	-	-
	Aev04g3394	475	SUPERFAMILY	Actin-like ATPase domain	52	280	IPR043129	-
	Aev04g3394	475	SUPERFAMILY	Actin-like ATPase domain	288	469	IPR043129	-
	Aev04g3394	475	PANTHER	D-RIBULOSE KINASE	50	470	-	-
	Aev04g3394	475	Pfam	FGGY family of carbohydrate kinases, N-terminal domain	52	281	IPR018484	GO:0005975\|GO:0016773
	Aev04g3394	475	Pfam	FGGY family of carbohydrate kinases, C-terminal domain	321	466	IPR018485	GO:0005975\|GO:0016773
	Aev04g3394	475	PIRSF	GlpK	50	475	IPR000577	GO:0005975\|GO:0016301

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Aev04g3394	K22935		-	gmx:100779892	767.303

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Aev04g3394	04	32628801	32632272	Aev04g3394	04	32628801	32632272	ECH