LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Aev04g3383	ATGAATCGAACACGCATTCTCTTCCTTATCTTCTCCCTCTTCTTTGTTTCACACTTCTCGCCGGAAACCGCCGCTGCCGACGGTGATGATCCGTTAATCCGGCAGGTGGTAGATGGCGACGGCGACGGCGAAGCTCACTTGGGAGCGGAGCACCACTTCTCTGTTTTCAAGCGGAGGTTCGGGAAGGCGTATTCTAGCAAGGAGGAGCACGATTACAGGTTCGAGGTGTTCAAGGCTAACATGCGTCGTGCTAAGCACCACCAGATCCTTGACCCTTCGGCGGTTCACGGCGTGACGCGATTCTCGGACATGACGGAGGAGGAGTTCAGGGAGAGTGTTTTGGGACTGAGAGGAGTGAGGTTGCCTTCTGATGCGAATAAGGCTCCGATCTTGCCAACTGATAATCTTCCATCTGATTTTGATTGGAGAGATCACGGAGCTGTTACCTCTGTCAAAAATCAGGGCTCGTGCGGATCTTGTTGGAGCTTCAGCACAACAGGGGCGTTGGAAGGTGCTCATTTCCTCGCTACTGGGGAGCTTGTCAGTCTCAGTGAACAACAGCTTGTTGATTGTGATCACGAGTGTGATCCAGAAGAAAAAGGTTCATGCGACTCTGGGTGCAATGGTGGATTGATGAACAGTGCTTTTGAATACATCCTTAAGTCCGGTGGGGTCATGAGAGAGGAAGATTATCCTTATTCAGGTACCGATCGTGGGACCTGCAAATTTGACAAGACAAAGATTGCAGCATCAGTAGCAAACTTCAGCTTTGTTTCACTTGATGAAGACCAGATTGCTGCGAATCTTGTGAAAAATGGCCCACTTGCAGTGGCTATCAATGCAGTATTTATGCAGACATATGTTGGTGGAGTATCATGCCCATACGTATGTTCAAAGAGGCAGGATCATGGGGTATTACTGGTGGGTTATGGTTCGGGTGGGTATGCTCCGATTCGGATGAAGGAGAAGCCATATTGGATCATTAAGAATTCATGGGGAGAGAACTGGGGAGAAAATGGATACTACAAGATTTGCAGGGGACGAAATATCTGTGGAGTGGACTCCATGGTTTCCACTGTGGCTGCTGTTCATACTACTGCTGCTCATTAG	1110	0.491	MNRTRILFLIFSLFFVSHFSPETAAADGDDPLIRQVVDGDGDGEAHLGAEHHFSVFKRRFGKAYSSKEEHDYRFEVFKANMRRAKHHQILDPSAVHGVTRFSDMTEEEFRESVLGLRGVRLPSDANKAPILPTDNLPSDFDWRDHGAVTSVKNQGSCGSCWSFSTTGALEGAHFLATGELVSLSEQQLVDCDHECDPEEKGSCDSGCNGGLMNSAFEYILKSGGVMREEDYPYSGTDRGTCKFDKTKIAASVANFSFVSLDEDQIAANLVKNGPLAVAINAVFMQTYVGGVSCPYVCSKRQDHGVLLVGYGSGGYAPIRMKEKPYWIIKNSWGENWGENGYYKICRGRNICGVDSMVSTVAAVHTTAAH*	370

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Aev04g3383	369	Pfam	Cathepsin propeptide inhibitor domain (I29)	53	109	IPR013201	-
	Aev04g3383	369	Pfam	Papain family cysteine protease	136	359	IPR000668	GO:0006508\|GO:0008234
	Aev04g3383	369	SMART	pept_c1	136	361	IPR000668	GO:0006508\|GO:0008234
	Aev04g3383	369	ProSitePatterns	Eukaryotic thiol (cysteine) proteases asparagine active site.	325	344	IPR025661	-
	Aev04g3383	369	ProSitePatterns	Eukaryotic thiol (cysteine) proteases cysteine active site.	154	165	IPR000169	-
	Aev04g3383	369	PANTHER	CYSTEINE PROTEASE FAMILY C1-RELATED	27	362	-	-
	Aev04g3383	369	SUPERFAMILY	Cysteine proteinases	48	359	IPR038765	-
	Aev04g3383	369	PRINTS	Papain cysteine protease (C1) family signature	303	313	IPR000668	GO:0006508\|GO:0008234
	Aev04g3383	369	PRINTS	Papain cysteine protease (C1) family signature	154	169	IPR000668	GO:0006508\|GO:0008234
	Aev04g3383	369	PRINTS	Papain cysteine protease (C1) family signature	325	331	IPR000668	GO:0006508\|GO:0008234
	Aev04g3383	369	PANTHER	CYSTEINE PROTEASE RD19C-RELATED	27	362	-	-
	Aev04g3383	369	CDD	Peptidase_C1A	137	360	IPR039417	-
	Aev04g3383	369	Gene3D	Cysteine proteinases	34	361	-	-
	Aev04g3383	369	SMART	Inhibitor_I29_2	53	109	IPR013201	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Aev04g3383	Aev-Chr4	32555281	32557192	Dispersed/Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Aev04g3383	K01373		-	zju:107426701	622.083

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Aev04g3383	04	32555281	32557192	Aev04g3383	04	32555281	32557192	ECH