Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g3378 ATGCTTGTGCTTTTTGAAACCCCTGCGGGTTTTGCCCTCTTTAAGGTCCTCGACGAAGGCAAGCTTTCCAAAGTTGAGGACTTGTGGAAAGACTTTTCAAGTGTGGACTCTGCTAGACAGGTGGTCAAGTTGAAGGCTTTTTCTAAGTTTGAGAATACGTCCGAGGCTCTGGAGGCAGCTACTTTGTTGATTGATGGAAAAGCTAGCAAGGGTCTGCGCAAGTTCCTCCGTGCTCATTGTGAAAATGAGACATTGGCTGTCTCTGATTCTAAGCTTGGGAATTTGATCAAGGAGAAATTGCAAATTGATTGTGTTCACAACAATGCTGTTATGGAGTTGATGAGAGGTGTTAGAAATCAGTTAAATGAACTCATATCTGGTCTCGCTGTACAAGACATGGCCCCTATGAGCCTTGGTTTATCTCATAGCTTATCCAGATACAAGCTCAAGTTTAGTGCTGAGAAGGTGGATACCATGATTGTCCAGGCTATTGGTTTACTTGATGATCTTGACAAAGAGTTGAATACATATGCCATGAGGGTTCGCGAATGGTATGGTTGGCATTTTCCAGAGCTCACTAAAATTATACAGGATAACATCCAATATGCAAGGGCAGTCAAGTTGATGGGTGATCGTGTTAATGCTGCAAGTCTTGATTTCTCTGAGATTTTGCCAGAGGAAGTTGAGGCAGAACTGAAGGAGGCATCTGTGATATCTATGGGAACTGAAATAGGTGAGCTTGATTTGGCAAATATCAGAGAACTCTGTGACCAGGTTTTGTCTCTTTCAGAGTACAGAGCACAACTCTATGATTATCTGAAAAGTAGGATGAACACAATTGCACCAAATTTGACTGCTATGGTCGGGGAGCTTGTTGGTGCTCGCCTCATTGCCCATGGTGGTAGCTTATTAAATCTTGCAAAGCAGCCTGGTAGTACTGTCCAGATTCTTGGTGCTGAGAAGGCTCTATTTAGGGCACTGAAGACTAAGCATTCTACTCCCAAGTATGGTCTTATTTACCATGCATCATTGATTGGTCAGGCAGCTCCCAAATTAAAGGGGAAAATTTCTCGGTCACTTGCTGCAAAGACAGCTTTGGCAATCAGGTGTGATGCTCTTGGAGATGGCCAAGATAACACTATGGGGTTGGAGAACAGAGCCAAGCTTGAAGCACGATTGAGAAACCTTGAAGGCAAAGAGTTAGGTCGTTTTGCTGGTTCAGCTAAAGGGAAACCAAAGATAGAAGCATATGACAAGGATCGAAAGAAGGCAGCTGGTGGATTGATAACCCCGGCTAAGACATACAATCCTTCAGCTGATTCAGTTATTGGCAAAGTGGCTGATTCTGCCATGGACGAAGATACAGAGCAACCTCCTGTCACTGATAAAAAGAAGGAAAAGAAGGAGAAGAAAGAAAAGAAGAAAAAGGAGGAGAAAATTGAAGAGGATGGTGAAGCTGGTGAGGAAGCAGAACAGGAAGTGAAGAAAGAGAAGAAGAAGAAAAGAAAGGATTCTGCTGAGAATGCTGAGGTGCAGAATGGAGACAATGATGTAGATGCAGGTGAAAAGAAGAAAAAGAGGAAAAAACATGCAGAGCAAGAAGAATCAGCTGAAATGCCAACCAAAAAGAAAGGGAAAAAGAAGAAGAGTGAGGACTAA 1659 0.4304 MLVLFETPAGFALFKVLDEGKLSKVEDLWKDFSSVDSARQVVKLKAFSKFENTSEALEAATLLIDGKASKGLRKFLRAHCENETLAVSDSKLGNLIKEKLQIDCVHNNAVMELMRGVRNQLNELISGLAVQDMAPMSLGLSHSLSRYKLKFSAEKVDTMIVQAIGLLDDLDKELNTYAMRVREWYGWHFPELTKIIQDNIQYARAVKLMGDRVNAASLDFSEILPEEVEAELKEASVISMGTEIGELDLANIRELCDQVLSLSEYRAQLYDYLKSRMNTIAPNLTAMVGELVGARLIAHGGSLLNLAKQPGSTVQILGAEKALFRALKTKHSTPKYGLIYHASLIGQAAPKLKGKISRSLAAKTALAIRCDALGDGQDNTMGLENRAKLEARLRNLEGKELGRFAGSAKGKPKIEAYDKDRKKAAGGLITPAKTYNPSADSVIGKVADSAMDEDTEQPPVTDKKKEKKEKKEKKKKEEKIEEDGEAGEEAEQEVKKEKKKKRKDSAENAEVQNGDNDVDAGEKKKKRKKHAEQEESAEMPTKKKGKKKKSED* 553
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g3378 552 Gene3D Nop domain 285 397 IPR042239 -
Aev04g3378 552 PANTHER NUCLEOLAR PROTEIN 5 NUCLEOLAR PROTEIN NOP5 NOP58 1 551 IPR045056 GO:0030515|GO:0031428|GO:0032040
Aev04g3378 552 Pfam snoRNA binding domain, fibrillarin 166 394 IPR002687 -
Aev04g3378 552 MobiDBLite consensus disorder prediction 489 552 - -
Aev04g3378 552 MobiDBLite consensus disorder prediction 449 482 - -
Aev04g3378 552 Gene3D - 129 284 - -
Aev04g3378 552 SUPERFAMILY Nop domain 153 397 IPR036070 -
Aev04g3378 552 Coils Coil 460 509 - -
Aev04g3378 552 MobiDBLite consensus disorder prediction 449 552 - -
Aev04g3378 552 Pfam NOP5NT (NUC127) domain 2 66 IPR012974 -
Aev04g3378 552 ProSiteProfiles Nop domain profile. 280 398 IPR002687 -
Aev04g3378 552 PANTHER PROTEIN NOP56, PUTATIVE-RELATED 1 551 - -
Aev04g3378 552 SMART NOSIC_2 159 211 IPR012976 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g3378 Aev-Chr4 32521893 32525135 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g3378 K14565 - gmx:100784721 894.419