Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g3373 ATGGTGCTGCAGCAGAAGCCACCACGCGCGTGTACGGAATCGATTTCTTGTCTTCTTCTCTGTCGTCTTGGCGGTGGCTTCTACTGTGATCCTGCTCATAAATCTCTCTTCTTCTTCTTCTTCTTGTTCCGGAATTCCGCAATGTCTGGTCCACTCGATCGTTTCGCCAGACCATGCTTTGAGGGTTTTTCTGGTAGTGATGAGAAGAAGGAAAGGAGATCTGATTTTGAGAACTCTGAGGATGAAAGGAGAACAAGGATCGGGTCTCTAAAAAAGAAGGCGCTCAATGCATCTTCAAAGTTCAAGCATTCTTTAAAGAAGAAGAGCAGCAGGAGAAAGAGTGACGGTCGGGTTAGCTCAGTTTCCATTGAGGATGTGAGGGATTATGAGGAGCTGCAGGCTGTAGATGCATTTCGGCAGTCGTTGATCATGGACGAATTGCTTCCCGAAAAACATGATGATTACCATATGATGTTAAGGTTTCTGAAAGCAAGGAAATTTGATATTGAAAAAGCAAAGCATATGTGGGCTGATATGCTGCAATGGAGGAAGGAGTTTGGCACTGACACTATTATGGAGGATTTTGAGTTCAAAGAGTTTAACGACGTTATAAGGTATTATCCACATGGCTATCATGGTGTTGATAAGGAGGGAAGACCTGTTTACATTGAAAGACTTGGAAAAGTTGATCCAAACAAAATCATGCAAACTACAACTATGGATAGATATGTAAAGTACCACGTACAGGAGTTTGAGAAAGCTTTTGCGATAAAGTTTACTGCTTGCACTATTGCTGCCAAAAGGCACATAGATTCAAGCACCACAATCTTAGATGTTCAAGGCGTGGGCCTCAAGAACTTTACGAAGTCTGCCCGGGAACTTATTATGCGATTACAGAAGATTGATAGTGACAATTATCCTGAGACTCTCTTCCAAATGTTTATCATAAATGCTGGCCCTGGATTTAGACTGCTGTGGAATACTATCAAGTCTTTTCTTGATCCCAAGACAACTTCAAAGATTCATGTTTTAGGAAACAAGTACCAAGGCAAATTGCTTGAAATAATTGATGCCAGTGAATTGCCAGAATTTCTGGGAGGTACCTGTACTTGTGCAGATCAGGGAGGTTGCCTCAGATCGGATAAAGGACCCTGGAAAAACCCTGAAATATTGAAGATGATTCTCAATGGTGAAACACGGGGGACAAGGCAGATAGTAAAAGTTCTAAACAGTGAAGGGAAGGTTATTGCATATGCCAAACCACGGTACCCAATGGTAAAAGGCAGTGATACATCCACAGCTGAATCAGGGTCTGAAGCTGAAGATATGGCTTCTCCAAAAGCGGGGAAAAGTTACTCACACCTTAGGTTGACCCCTGTCCGCGAGGAAGCTAAGCTAGTCGGAAAGACAACCTATGTAGGTAGTGGTAGCTTGTCTGGTTATGATGAATATGTGCCAATGGTGGACAAACCTGTTGATGCTTGCTGGAAGAAGCAAACTTCACTCCAGATGTCTCAAACTTCGAAAGGCACATCTTCCATTTCTAACACTCCGAAAAGACCTGAAGGGATACAAGCTCCGATTTGGGTAGCCCTTACTGTATTCTTTTTGAGCCTATTTACCCTCTTCCGTACGGTTGCATGCCGAGTGACCAGGAAACTTCCTGCAGTATCATCTAATGATAATCAGAGCACTTCAGAGCCAACTCTTAATACAACAAAGATGGGAGATTGTCGCTCTTCTTCACCTACCCCAGCACATACAGAGGAAAATCTCCTTTCCTCCATGATGAAAAGGTTAGGTGAGCTTGAAGAGAAGGTTGACACACTCCAGTCCAAGCCATCTGAGATGCCTAATGAGAAGGAGGAATTGCTAAATGCTGCGGTGTGCCGGGTAGATGCTTTGGAAGCAGAGTTAATTGCGACAAAAAAGGCTCTCTATGAAGCACTAATGAGGCAAGAAGAACTACTTGCTTACATCGATAGTCAAGAAGAAGCAAAGCTTAGGAAGAAGAAATTTTGCTGGTGA 2028 0.4324 MVLQQKPPRACTESISCLLLCRLGGGFYCDPAHKSLFFFFFLFRNSAMSGPLDRFARPCFEGFSGSDEKKERRSDFENSEDERRTRIGSLKKKALNASSKFKHSLKKKSSRRKSDGRVSSVSIEDVRDYEELQAVDAFRQSLIMDELLPEKHDDYHMMLRFLKARKFDIEKAKHMWADMLQWRKEFGTDTIMEDFEFKEFNDVIRYYPHGYHGVDKEGRPVYIERLGKVDPNKIMQTTTMDRYVKYHVQEFEKAFAIKFTACTIAAKRHIDSSTTILDVQGVGLKNFTKSARELIMRLQKIDSDNYPETLFQMFIINAGPGFRLLWNTIKSFLDPKTTSKIHVLGNKYQGKLLEIIDASELPEFLGGTCTCADQGGCLRSDKGPWKNPEILKMILNGETRGTRQIVKVLNSEGKVIAYAKPRYPMVKGSDTSTAESGSEAEDMASPKAGKSYSHLRLTPVREEAKLVGKTTYVGSGSLSGYDEYVPMVDKPVDACWKKQTSLQMSQTSKGTSSISNTPKRPEGIQAPIWVALTVFFLSLFTLFRTVACRVTRKLPAVSSNDNQSTSEPTLNTTKMGDCRSSSPTPAHTEENLLSSMMKRLGELEEKVDTLQSKPSEMPNEKEELLNAAVCRVDALEAELIATKKALYEALMRQEELLAYIDSQEEAKLRKKKFCW* 676
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g3373 675 PRINTS Cellular retinaldehyde-binding protein signature 326 345 - -
Aev04g3373 675 PRINTS Cellular retinaldehyde-binding protein signature 157 179 - -
Aev04g3373 675 PRINTS Cellular retinaldehyde-binding protein signature 359 368 - -
Aev04g3373 675 CDD SEC14 200 368 IPR001251 -
Aev04g3373 675 Pfam CRAL/TRIO, N-terminal domain 150 178 IPR011074 -
Aev04g3373 675 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 199 373 IPR001251 -
Aev04g3373 675 SUPERFAMILY CRAL/TRIO domain 200 392 IPR036865 -
Aev04g3373 675 PANTHER CRAL-TRIO DOMAIN-CONTAINING PROTEIN YKL091C-RELATED 50 672 - -
Aev04g3373 675 Pfam CRAL/TRIO domain 206 367 IPR001251 -
Aev04g3373 675 Gene3D - 187 397 IPR036865 -
Aev04g3373 675 Gene3D - 100 186 - -
Aev04g3373 675 SMART sec14_4 199 370 IPR001251 -
Aev04g3373 675 MobiDBLite consensus disorder prediction 427 448 - -
Aev04g3373 675 SMART CRAL_TRIO_N_2 154 179 IPR011074 -
Aev04g3373 675 MobiDBLite consensus disorder prediction 556 588 - -
Aev04g3373 675 SUPERFAMILY CRAL/TRIO N-terminal domain 128 195 IPR036273 -
Aev04g3373 675 Coils Coil 586 613 - -
Aev04g3373 675 PANTHER PHOSPHATIDYLINOSITOL/PHOSPHATIDYLCHOLINE TRANSFER PROTEIN SFH8 50 672 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g3373 Aev-Chr4 32479269 32483752 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev04g3373 133 364 Acyl Lipid Metabolism Gene Families AT5G47730 28.395 5.78e-20 90.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g3373 - - gmx:100785793 1059.28
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev04g3373 04 32479269 32483752 Aev04g3373 04 32479269 32483752 ECH