LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Aev04g3360	ATGGCATCTGCATGTGTGACCATGAAAGCCAATACCAATTTTCTAAACACAATGAAAGAAAGTACTTTTGTTCAAGATAGTGGATTCTTAGGTGAAAGGGTTAAGGGTGGACTGAATTACAGTCCTTGGGTTGTTAACAATTTGGGACCAAAATTGAGAATCAAAGAGAGATTCAGCAAGAAGGCAAAACCTGATGCTGTTATATCTGCTGTTCTTACATCAAACACTAGTACCAAAGAGGCATTGACAATTCAAATGCCATCTTTTCTGAGAAGAAAAGCTGACCCAAAAAATGTTGTTTCCATCATATTGGGAGGAGGTCCTGGGACTCATCTGTTTCCTCTTACCAAAAGAGCTGCTACACCTGCTGTGCCGGTTGGTGGATGCTATAGGCTTATAGACATCCCAATGAGCAACTGCATCAACAGTGGAATAAACAAAATATTTGTTCTGACACAGTTCAACTCTGCATCCCTCAATCGCCACATAGCTAGGACCTACTTTGGAAACGGCATCAACTTTGGAGATGGATATGTAGAGGTTCTAGCAGCTACTCAAACACCAGGTGAAGCTGGAAAGAGGTGGTTCCAAGGAACTGCAGATGCTGTGAGGCAATTTACATGGGTATTTGAGGATGCAAAGCACACCAATGTTGAAAATGTTTTGATCTTGGCTGGTGATCATCTATACCGAATGGACTACATGGACCTTGTGCAGAGTCATATAGACAGAAATGCAGATATTACAGTATCATGTGCTGCTGTTGATGACAGCCGTGCATCGGATTATGGACTGGTCAAGGTTGATGGCAGAGGTAGGATCGTCCATTTTTCTGAAAAACCGAAGGCTGCTGATCTCAAAGCAATGCAAGTAGATACTTCTATTCTGGGGTTGTCACCCCAAGATGCAATGAAGTCACCATATATTGCATCCATGGGGGTTTATGTTTTCAAGACAGATGTTTTACTCAAGCTTCTGAAATGGAGATATCCAACATCCAATGACTTCGGATCCGAAATCATTCCTGCAGCTGTTAGGGAACACAATGTTCAATCATACTTTTTCGGAGACTATTGGGAAGACATTGGAACAATAAAATCCTTTTATGATGCTAACATGGCTCTTACTGAAGAGAATCCTATGTTCAAATTTTATGATCCCAAGACACCAATCTACACATCTCCAAGATTCCTACCACCAACAAAGATCGATAAATGCCGGATTATGGATGCAATAATCTCCCACGGATGTTTCCTGCGCGAATGTACTGTCCAGCATTCTATTGTTGGTGAAAGATCGCGTTTGGATTATGGCGTCGAGCTCCAGGACACTATAATGATGGGAGCAGACTATTACCAAACCGAATCCGAAATTGCTTCTCTGTTGGCAGATGGGAAGGTTCCCATTGGCATAGGAAGGAACACCAAAATCAGGAACTGCATAATTGACAAGAATGCAAAGATTGGGAAAGATGTCATCATCATGAACAAAGATGGAGTTGAAGAAGCAGATAGACCAGAAGGTGGATTCTACATTAGGTCAGGAATCACCATCATCATGGAGAAGGCAACCATAGAGGATGGCACTATCATATAA	1596	0.4185	MASACVTMKANTNFLNTMKESTFVQDSGFLGERVKGGLNYSPWVVNNLGPKLRIKERFSKKAKPDAVISAVLTSNTSTKEALTIQMPSFLRRKADPKNVVSIILGGGPGTHLFPLTKRAATPAVPVGGCYRLIDIPMSNCINSGINKIFVLTQFNSASLNRHIARTYFGNGINFGDGYVEVLAATQTPGEAGKRWFQGTADAVRQFTWVFEDAKHTNVENVLILAGDHLYRMDYMDLVQSHIDRNADITVSCAAVDDSRASDYGLVKVDGRGRIVHFSEKPKAADLKAMQVDTSILGLSPQDAMKSPYIASMGVYVFKTDVLLKLLKWRYPTSNDFGSEIIPAAVREHNVQSYFFGDYWEDIGTIKSFYDANMALTEENPMFKFYDPKTPIYTSPRFLPPTKIDKCRIMDAIISHGCFLRECTVQHSIVGERSRLDYGVELQDTIMMGADYYQTESEIASLLADGKVPIGIGRNTKIRNCIIDKNAKIGKDVIIMNKDGVEEADRPEGGFYIRSGITIIMEKATIEDGTII*	532

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Aev04g3360	531	ProSitePatterns	ADP-glucose pyrophosphorylase signature 1.	105	124	IPR005836	GO:0005978\|GO:0008878
	Aev04g3360	531	PANTHER	GLUCOSE-1-PHOSPHATE ADENYLYLTRANSFERASE-RELATED	1	531	IPR011831	GO:0005978\|GO:0008878
	Aev04g3360	531	PANTHER	GLUCOSE-1-PHOSPHATE ADENYLYLTRANSFERASE	1	531	-	-
	Aev04g3360	531	SUPERFAMILY	Trimeric LpxA-like enzymes	393	531	IPR011004	-
	Aev04g3360	531	Pfam	Nucleotidyl transferase	101	377	IPR005835	GO:0009058\|GO:0016779
	Aev04g3360	531	TIGRFAM	glgC: glucose-1-phosphate adenylyltransferase	99	495	IPR011831	GO:0005978\|GO:0008878
	Aev04g3360	531	Gene3D	Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A	85	396	IPR029044	-
	Aev04g3360	531	SUPERFAMILY	Nucleotide-diphospho-sugar transferases	97	492	IPR029044	-
	Aev04g3360	531	CDD	LbH_G1P_AT_C	399	525	-	-
	Aev04g3360	531	ProSitePatterns	ADP-glucose pyrophosphorylase signature 2.	195	203	IPR005836	GO:0005978\|GO:0008878
	Aev04g3360	531	CDD	ADP_Glucose_PP	102	362	-	-
	Aev04g3360	531	ProSitePatterns	ADP-glucose pyrophosphorylase signature 3.	310	320	IPR005836	GO:0005978\|GO:0008878
	Aev04g3360	531	Gene3D	Hexapeptide repeat proteins	397	531	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Aev04g3360	Aev-Chr4	32410126	32414190	Dispersed/Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Aev04g3360	K00975		-	gmx:100808791	949.503

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Aev04g3360	04	32410126	32414190	Aev04g3360	04	32410126	32414190	ECH