Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g3330 ATGGCTTTCCAAAGCCAGGTTGGGTTGGGATTGCTCCTTTACCCTATTAATTCCAACATTGTTCTCAGAACAGCATGTTGTTCTGTTGGGCTTGTTCTACCCGTTTACTCTACTTTCAAGGCTATTGAGAACAAAGACCAAAATGAGCAACACAAGTGGCTCTTATATTGGGCAGCTTATGGATCTTTTAGTGCAGCAGAAATGTTTGCAGAGAAATTACTGTCCTGGTTTCCTCTCTATTACCACATGAAGTTTGCATTTCTTGTTTGGTTGCAGCTTCCCACGATTAATGGTGCAAGACAACTCTATGCTAGTCACTTGCGTCCATTCCTGTTAAAGCATCAAGCTAGAATGGATCTCATTGTCGGAACCGTGTATGGTGAACTGAGTAAATTTGTCAGTGCACACCAAGCGGAATTGCAGATTGCAAGATCTGTTGGAGTGAATGTTCTGGTGACCGCAAATCAAATGATTAGGAGTGTAATTCAACCGGTTAAAAGGGAATCAAAACGCATTGAAGGACCAAAGAAGCAGGTTCAAGATGCAGAATTACAAGGAGAAGATTAA 567 0.4162 MAFQSQVGLGLLLYPINSNIVLRTACCSVGLVLPVYSTFKAIENKDQNEQHKWLLYWAAYGSFSAAEMFAEKLLSWFPLYYHMKFAFLVWLQLPTINGARQLYASHLRPFLLKHQARMDLIVGTVYGELSKFVSAHQAELQIARSVGVNVLVTANQMIRSVIQPVKRESKRIEGPKKQVQDAELQGED* 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g3330 188 PANTHER HVA22-LIKE PROTEINS 4 183 IPR004345 -
Aev04g3330 188 Pfam TB2/DP1, HVA22 family 34 110 IPR004345 -
Aev04g3330 188 PANTHER HVA22-LIKE PROTEIN 4 183 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g3330 Aev-Chr4 32188490 32190583 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g3330 K17279 - pop:7456388 266.544
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev04g3330 04 32188490 32190583 Aev04g3330 04 32188490 32190583 ECH
Aev04g3330 04 32188490 32190583 Aev05g0539 05 3720544 3722950 ECH