Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g3308 ATGGCGGCAACTCAACTCCACAAACTGAAACGCTTCTCATTCTCATTCGCAATCACAAAACCAACCTCGTCTCTCTTCTTCTTCTTCTCATCATCATCGTCATCGTCCTCTTTCAACACCACAGCGACAACGACAATCTCAACCTCCCAGATCCTCGTAGAAACCGCTGTCTCCATCCTCACCCACCACCGCTCCAAGTCTCGCTGGACCACCCTTCACTCTCTCTGCACCCCCAACAATGGATTCAGCCCTACCCAGTTTTCTCAAATTGCCCTCCGCCTCAAGAACAAACCCCACCTCGTCCTCAACTTCTTCCTCTTCACCAAATCAAAGTCCCTCTGCAACCACAACCTCCATTCCTACTCCACCATCGTTCACATCCTCGCACGTGCCCGCCTCAAAACCCATGCCCAAAACGCCATCGCACTCGCCATTCGCGCTTCCGAGCTCCAAAACGACGACGACGATGATGGGCATTGTCGTTTCGATTCGCCGCCTCTGAAGGTCTTTGAGCACCTTGTGAAGACCTATCGAATTTGCGATTCGGCTCCGTTTGTTTTCGATTTGTTGATTAGGGCTTGTTTGGATTCTAGAAAGGTTGAGCCTTCGATTGAGATTGTTAGGATGCTGATATCTCGCGGGATCAGCCCCAAAGTTTGCACCTTGAACAACTTGATTTCTAGGGTTTGCAGAATTAGGGGTTTTGATGCTGGGTATGAGATTTACAATGAGTTTTTCAATGTGGGTGAGGTAAAAGAGGGAATTTTGAAGAGGGGTTTGGGTTTTAGGTTTGCCCCTAATGTGCATACCTATAATGAACTGATGCTGTGTTGCTATCAAGATGGTTTGGTGGGGAAAGTTGAGGAGATTTGGAATGAGATGGGTGAACTTAAGTGTGTTCCCAATGCTTATAGCTATTCTGTTTTGATGGCTGCTTTTTGTGATGAAGGGAGGATGAGAGATGCTGAGAAATTATGGGAAGAAATGAGGAATAAGAAAATGGAGCTTGATGTTATTTGTTACAATACTATAATTGGTGGGTTTTGCAAGATTGCAGATGTTGAAAGAGCTGAAGAATTTTTCAGGGAAATGCAATTGGGTGGTATTCACAGCACTGCTGCAACTTATGAACATCTGGTTAAGGGGTACTGCAATATTGGGGATGCTGATTCAGCTGTTCTTGTGTATAAGGATATGTGTAGGAAGGGTTTTAGGCCTGATGCTGCAATCCTTGACATGATGGTCAGGTTACTTTGTGATAAGGGTAGGGTTGATGAAGCTCTTGAGTTTGTTAGGATTGCAGCCAGTAGATTTGATTTGGTTCTCAAGGAGAAGAGTTATGAGGCACTGATAAAGGGGTTGTGTTCTGAGGAGAGGATGGAAGAAGCTCTGAAGCTTCAGGTAGAGATGGTAGGGAAAGGGTTTGAATCGAGTTCAGAAATATATGGTGCTTTTATTGATGGGTACATTAGGCAAGGGAAGAAGGATATGGCAGAAGCTTTGAGGAAAGAAATGCTTCAAATGCAGATGCAGAGATGA 1539 0.4516 MAATQLHKLKRFSFSFAITKPTSSLFFFFSSSSSSSSFNTTATTTISTSQILVETAVSILTHHRSKSRWTTLHSLCTPNNGFSPTQFSQIALRLKNKPHLVLNFFLFTKSKSLCNHNLHSYSTIVHILARARLKTHAQNAIALAIRASELQNDDDDDGHCRFDSPPLKVFEHLVKTYRICDSAPFVFDLLIRACLDSRKVEPSIEIVRMLISRGISPKVCTLNNLISRVCRIRGFDAGYEIYNEFFNVGEVKEGILKRGLGFRFAPNVHTYNELMLCCYQDGLVGKVEEIWNEMGELKCVPNAYSYSVLMAAFCDEGRMRDAEKLWEEMRNKKMELDVICYNTIIGGFCKIADVERAEEFFREMQLGGIHSTAATYEHLVKGYCNIGDADSAVLVYKDMCRKGFRPDAAILDMMVRLLCDKGRVDEALEFVRIAASRFDLVLKEKSYEALIKGLCSEERMEEALKLQVEMVGKGFESSSEIYGAFIDGYIRQGKKDMAEALRKEMLQMQMQR* 513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g3308 512 Gene3D Tetratricopeptide repeat domain 331 428 IPR011990 GO:0005515
Aev04g3308 512 PANTHER TETRATRICOPEPTIDE REPEAT (TPR)-LIKE SUPERFAMILY PROTEIN-RELATED 32 510 - -
Aev04g3308 512 PANTHER PPR CONTAINING PLANT-LIKE PROTEIN 32 510 - -
Aev04g3308 512 Coils Coil 498 512 - -
Aev04g3308 512 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 372 406 IPR002885 -
Aev04g3308 512 Pfam PPR repeat 481 508 IPR002885 -
Aev04g3308 512 Pfam PPR repeat 446 475 IPR002885 -
Aev04g3308 512 Pfam PPR repeat family 337 385 IPR002885 -
Aev04g3308 512 Pfam PPR repeat family 266 314 IPR002885 -
Aev04g3308 512 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 302 336 IPR002885 -
Aev04g3308 512 Gene3D Tetratricopeptide repeat domain 435 512 IPR011990 GO:0005515
Aev04g3308 512 Gene3D Tetratricopeptide repeat domain 249 329 IPR011990 GO:0005515
Aev04g3308 512 Gene3D Tetratricopeptide repeat domain 88 248 IPR011990 GO:0005515
Aev04g3308 512 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 267 301 IPR002885 -
Aev04g3308 512 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 183 217 IPR002885 -
Aev04g3308 512 TIGRFAM PPR: pentatricopeptide repeat domain 446 476 IPR002885 -
Aev04g3308 512 TIGRFAM PPR: pentatricopeptide repeat domain 269 303 IPR002885 -
Aev04g3308 512 TIGRFAM PPR: pentatricopeptide repeat domain 339 369 IPR002885 -
Aev04g3308 512 TIGRFAM PPR: pentatricopeptide repeat domain 375 408 IPR002885 -
Aev04g3308 512 TIGRFAM PPR: pentatricopeptide repeat domain 304 338 IPR002885 -
Aev04g3308 512 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 337 371 IPR002885 -
Aev04g3308 512 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 478 512 IPR002885 -
Aev04g3308 512 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 443 477 IPR002885 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev04g3308 82 511 Glycosyltransferase AT1G05670 24.440 1.08e-39 151
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g3308 - - gmx:100809831 650.203