Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g3307 ATGGATGCATTACCTGGCTCTGTGGGCACCAGTGCCAGCTTCAGTCTAAGATTGGGACAGACCATATTCTCATCTGCTTCCCTTCTCTTTATGTCTCTGGGTGTTGAATTCTACAGCTACACCGCTTTCTGCTATTTGGTTACAGTTATGGGTCTGGTCATACCTTGGAGTTTCACATTAACATTGGTAGATGGATACTCTGTTCTGGTCAAATGCCCGATTCGTCAACAAGGAATACTTCTGATCATTGTTGCTGGAGATTGGGTATTATCAACTCTCACACTAGCAGCAGCATGCTCAACAACTAGTGTTGTGGATCTTCTTCTCCACTCCCATGGTTCTTTTTGCCCTGCAAAGTTTTGCAGCAGATACCGGATATCTGCAATTATGGCCTTCATGACATGGTTTCTATCTTTGGCTTCCTCTCTTTTCAACCTTTGGCTATTACCCTCTTTGTGA 459 0.4401 MDALPGSVGTSASFSLRLGQTIFSSASLLFMSLGVEFYSYTAFCYLVTVMGLVIPWSFTLTLVDGYSVLVKCPIRQQGILLIIVAGDWVLSTLTLAAACSTTSVVDLLLHSHGSFCPAKFCSRYRISAIMAFMTWFLSLASSLFNLWLLPSL* 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g3307 152 Pfam Casparian strip membrane protein domain 9 137 IPR006702 -
Aev04g3307 152 PANTHER CASP-LIKE PROTEIN 5B3 1 151 IPR045009 -
Aev04g3307 152 PANTHER CASP-LIKE PROTEIN 5C3 1 151 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g3307 Aev-Chr4 32078912 32079917 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g3307 - - gmx:100791311 270.396
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev04g3307 04 32078912 32079917 Aev04g3307 04 32078912 32079917 ECH