Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g3276 ATGGCCGTCAACGACGCTGACCAATCCAACAAGCCTCACAGGACGCGCCAATCTGGCGCAAAGAAAGCCAAATCCAATAAGAAGAAGAAGAGAAAGCAGCGCAACAATGAAGCAGGAGAAGGAGAAAACCAGAATAATCAGAACCCAAAGGCGTTCGCGTTCTCTTCCTCCAATAAGGCCAAACGATTGAAATCACGCGCCGTCGAGAAAGAACAGCGCCGCCTACATGTTCCCATCATCGACCGCTCCTACGGCGAACCCCCTCCGTACGTCGTCGTGGTGCAGGGTCCACCCAAGGTTGGGAAGTCACTGTTGATAAAGTCTCTTGTTAAGCATTACACAAAGCATAATTTGCCTGATGTTCGAGGTCCAATTACTATCGTATCAGGAAAGCAAAGGAGGCTGCAGTTTGTAGAGTGCCCGAATGATATCAATGGCATGATTGATGCAGCAAAGTTTGCTGATCTAGCGCTGCTTGTTATAGATGGGTCTTATGGTTTTGAAATGGAAACCTTTGAATTCCTTAATATACTGCAAACACACGGGTTCCCGAAGGTCATGGGGGTTCTTACTCATCTTGACAAATTCAAGGATGCTAAAAAGTTGAGGAAACAAAAAAAAGAGCTCAAACACCGCTTTTGGACTGAAATATATGATGGAGCTAAATTGTTTTATCTATCGGGCCTTATTCATGGAAAGTACGTCAAGCGTGAAGTTCATAATCTTGCTCGATTTATTTCAGTCATGAAGTTTCATCCTTTATCTTGGAGAACATCCCACCCCTATGTTTTGGTTGATCGTTTTGAAGATATCACTCCTCCTGAAAAAGTTCATGCAAATGATAAATGTGACAGAAAGATCACGCTTTATGGTTATCTTAGGGGCTGTAACTTAAAAAAGGGGAACAAGGTACATATAGCTGGAGTGGGGGATTACGGTTTAGCTGGTGTTACTGCTTTACCTGATCCTTGTCCTCTTCCATCTGCTGCTAAAAAGAAAGGCCTGCGAGATAAGGAAAAGTTATTCTATGCTCCCATGTCTGGCCTTGGGGATCTATTGTATGACAAAGATGCAGTATACATAAATATTAATGATCATCTTGTTCAGTTTTCAAAAGCTGATGATGAAAACTCAGCCATGACAAACAAAGGAAAGGACAGAGATGTGGGGGAGTTTTTGGTTAAGTCACTCCAGAATACCAAATACTCAATCAATGAAAAGCTAGAGAACAGCTTTATCAACCTTTTTGGTCAAAAGTCAAAACTATCATCAGAAGCTGTAGCTGATGCACAGGTTATAGAGAATGATAGAAAAATAGAGGCTTTGGATAATGATCAACAGGGAAAAACTGCTGATGCTGGTTTGGTTGGTGAAGATAATAATGAAATGGATTTGGATGGTTCAGATTCATCTGATCAGGATGAAGCTGGTGACCAGTTAGTCGATGAAGCCAGTAGTTCTGATGATGAAGATGGTGATGAAATTGATCGGAAAGCTACTCATGAATCTCACTTAGAAGAACATATTGAGTTTCATGATGGAAGACGAAGGAGAAGAACAATCTTTGAAAATGATGTTGACCAAAGTGATGTGAAGGATTCAGAAGAAGAGGATGATGCTGCCAGTGATGATATGGCATCTTCTGATTCAGATTCTCCAAAAGAAGGGGAGGAAGATGACAGTGATGATGATGATGACACTGATGATGATCACATGGGAAATGTTTCAAAGTGGAAAGAATCTTTAGCAGAAAGAACTCTCTCACGGAAAACTCCTAGTTTAATGCAACTTGTGTATGGGGAATCTACCGCTAATATAGCGTCTAAAAACAAACAGGATGATGGTAGTGAGGATGAGGAAAGTGAAGATGACTTTTTTAAGCCTATTGAAGAAGTAAAAAAGCAAAGTGTGAGAAATGGAATGAATGATGGAATGGCCAACCGTGAGGATTGTTCCAAGTATGCAAAATTTGTGGATCAGAGATGGGGTGAGAAAGATAAGGAGGAGATTCGCAACCGTTTTGTGACTGGAGATTTGGCAAAAGCTGCTCTCAGAAATTCACTATCAAAAAGTAATACTGAAGATGAAAATGAAGATGTATACGGGGATTTTGAGGATTTAGAAACAGGAGAAAAACATGGGAACTACAAGACAGATGATGCTGGTGCCACAACAATACACAAAGGAGATGATTCGGAAGCTGAGCAGCGGAGGCTTAAGAAACTTGCGCTTCAGGAAGACACTGTTAATGAAAATGAAGCCAAATCTCAGCGTGGTCAAGCTAATGAAAGTAGCTATTTTGATAAGATGAAGGAGGAAATTGAACTTCGGAAACAAATGAATATCGCTGAACTCAATGAACTTGATGAGGCTACCAGAGTAGAGATAGAAGGCTTCCGAACTGGGATGTACATGAGATTGGAGATTCATGATGTTCCTTGTGAGATGGTTGAATACTTTGATCCCTACCATCCGATATTGGTTGGGGGGGTTGGTCTAGGGGAGGAAAATGTTGGATACATGCAGGCTAGGTTAAAACGGCACCGGTGGCACAAGAAAGTGTTGAAGACTAGAGATCCAATTATTGTTTCTGCTGGATGGAGGCGTTACCAAACAACACCAGTTTATGCTACTGAGGATCATAATGGAAGGATGCGTATGCTAAAATACACTCCAGAGCATGCACATTGCATTGCATTCTTTTGGGGCCCTCTTGTCCCTCCCAACACTGGGATAGTGGCTGTTCAGAGTTTAGCGACGAATCAGGCAACATTTAGGATTACTGCAACCGCAGTTGTACTCGAGTATAATCATGCGGCCAAGATAGTGAAGAAAATCAAGTTGGTTGGGTACCCATGCAAAATTTTCAAGAAAACAGCATTTATCAAGGATATGTTTACTTCAGATCTTGAGGTAGCTCGCTTTGAAGGTGCAGCAATTCGTACAGTCAGTGGTATCAGGGGGCAAGTCAAAAAGGCTGCAAAAGAAGAGATCGGTAACCAACCAAATCGGAAGGGTGGGCAAACCAAAGAAGGAATTGCTAGGTGCACTTTTGAAGACAAGATCCTGATGAGTGACATTGTTTTTCTGCGTGCATGGACTCAAGTCGAAGTCCCTCAATTTTATAATCCATTGACAACAGCACTGCAGCCTCGCGACAAGACCTGGCAAGGAATGCGGACCGTTGCAGAATTGAGAAGAGAACATAACCTTGCAATACCTGTAAATAAAGATTCACTTTACAAGAAAATTGAAAGAAAGCAAAAGAAGTTCAACCCGCTGGTGATTCCCAAGTCACTACAGGCAAAGCTTCCTTTTGAATCAAAACCAAAGGATATACCGAAGCGAAAAAGGCCATCACTTGATCAGAAAAGGGCCGTTATCGTGGATGGTCCTGAGCGTGAAGTTCGTCGTTATGTTCAACAGCTAACTTTAATGAACAGTAATAAGGTGAAAAAGCGAAAGCTTACCGAAGAGAAGAAGAGGAAAGCACTCGAGAAAGCGAGAGCAAAAGATGAACAGGTATCGAAAAAGCGCCAGCGAGAGGAAAGACGGGAGAAGTATCGTGCGCAAGACAAGCTGAAACCATTCACTCCCTCTGCCGGCGAAGTAGCTGCTGTGCCACCTGCCTCCCGCCGTCGCTGCTGTGCCACCGCTGCCTTGCGCCGTCGCTGCTGTGCCTCATCGCGCCCTGCTTCGTCTACCGCCACTGCCTTGCGGATTCGTTGCCTTGAGGATCTCTCTCTTCCGCTATACGTGCTTCGTGAGGACGCCGCTCGTGACGGGCATTGCCGTTCCGCTATTGGACTTGGCTCAAAAGCAGATAGGGTCTGA 3834 0.4338 MAVNDADQSNKPHRTRQSGAKKAKSNKKKKRKQRNNEAGEGENQNNQNPKAFAFSSSNKAKRLKSRAVEKEQRRLHVPIIDRSYGEPPPYVVVVQGPPKVGKSLLIKSLVKHYTKHNLPDVRGPITIVSGKQRRLQFVECPNDINGMIDAAKFADLALLVIDGSYGFEMETFEFLNILQTHGFPKVMGVLTHLDKFKDAKKLRKQKKELKHRFWTEIYDGAKLFYLSGLIHGKYVKREVHNLARFISVMKFHPLSWRTSHPYVLVDRFEDITPPEKVHANDKCDRKITLYGYLRGCNLKKGNKVHIAGVGDYGLAGVTALPDPCPLPSAAKKKGLRDKEKLFYAPMSGLGDLLYDKDAVYININDHLVQFSKADDENSAMTNKGKDRDVGEFLVKSLQNTKYSINEKLENSFINLFGQKSKLSSEAVADAQVIENDRKIEALDNDQQGKTADAGLVGEDNNEMDLDGSDSSDQDEAGDQLVDEASSSDDEDGDEIDRKATHESHLEEHIEFHDGRRRRRTIFENDVDQSDVKDSEEEDDAASDDMASSDSDSPKEGEEDDSDDDDDTDDDHMGNVSKWKESLAERTLSRKTPSLMQLVYGESTANIASKNKQDDGSEDEESEDDFFKPIEEVKKQSVRNGMNDGMANREDCSKYAKFVDQRWGEKDKEEIRNRFVTGDLAKAALRNSLSKSNTEDENEDVYGDFEDLETGEKHGNYKTDDAGATTIHKGDDSEAEQRRLKKLALQEDTVNENEAKSQRGQANESSYFDKMKEEIELRKQMNIAELNELDEATRVEIEGFRTGMYMRLEIHDVPCEMVEYFDPYHPILVGGVGLGEENVGYMQARLKRHRWHKKVLKTRDPIIVSAGWRRYQTTPVYATEDHNGRMRMLKYTPEHAHCIAFFWGPLVPPNTGIVAVQSLATNQATFRITATAVVLEYNHAAKIVKKIKLVGYPCKIFKKTAFIKDMFTSDLEVARFEGAAIRTVSGIRGQVKKAAKEEIGNQPNRKGGQTKEGIARCTFEDKILMSDIVFLRAWTQVEVPQFYNPLTTALQPRDKTWQGMRTVAELRREHNLAIPVNKDSLYKKIERKQKKFNPLVIPKSLQAKLPFESKPKDIPKRKRPSLDQKRAVIVDGPEREVRRYVQQLTLMNSNKVKKRKLTEEKKRKALEKARAKDEQVSKKRQREERREKYRAQDKLKPFTPSAGEVAAVPPASRRRCCATAALRRRCCASSRPASSTATALRIRCLEDLSLPLYVLREDAARDGHCRSAIGLGSKADRV* 1278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g3276 1277 PANTHER BNAC08G44910D PROTEIN 479 1212 - -
Aev04g3276 1277 PANTHER BNAC08G44910D PROTEIN 6 421 - -
Aev04g3276 1277 MobiDBLite consensus disorder prediction 462 490 - -
Aev04g3276 1277 PANTHER RIBOSOME BIOGENESIS PROTEIN 479 1212 IPR039761 GO:0042254
Aev04g3276 1277 PANTHER RIBOSOME BIOGENESIS PROTEIN 6 421 IPR039761 GO:0042254
Aev04g3276 1277 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 86 226 IPR027417 -
Aev04g3276 1277 MobiDBLite consensus disorder prediction 745 764 - -
Aev04g3276 1277 MobiDBLite consensus disorder prediction 708 737 - -
Aev04g3276 1277 Pfam AARP2CN (NUC121) domain 238 323 IPR012948 GO:0005634|GO:0042254
Aev04g3276 1277 MobiDBLite consensus disorder prediction 587 610 - -
Aev04g3276 1277 MobiDBLite consensus disorder prediction 1 70 - -
Aev04g3276 1277 Gene3D - 90 252 IPR027417 -
Aev04g3276 1277 SMART aarp2cn2 238 324 IPR012948 GO:0005634|GO:0042254
Aev04g3276 1277 Coils Coil 1153 1185 - -
Aev04g3276 1277 MobiDBLite consensus disorder prediction 529 545 - -
Aev04g3276 1277 MobiDBLite consensus disorder prediction 491 528 - -
Aev04g3276 1277 ProSiteProfiles Bms1-type guanine nucleotide-binding (G) domain profile. 87 252 IPR030387 -
Aev04g3276 1277 MobiDBLite consensus disorder prediction 553 569 - -
Aev04g3276 1277 SMART DUF663_2 725 1036 IPR007034 -
Aev04g3276 1277 MobiDBLite consensus disorder prediction 439 647 - -
Aev04g3276 1277 CDD BMS1 51 280 IPR037875 GO:0005525
Aev04g3276 1277 MobiDBLite consensus disorder prediction 570 586 - -
Aev04g3276 1277 MobiDBLite consensus disorder prediction 39 61 - -
Aev04g3276 1277 MobiDBLite consensus disorder prediction 15 32 - -
Aev04g3276 1277 MobiDBLite consensus disorder prediction 1151 1189 - -
Aev04g3276 1277 Pfam 40S ribosome biogenesis protein Tsr1 and BMS1 C-terminal 733 1037 IPR007034 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g3276 K14569 - gmx:100810906 1772.67