Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g3266 ATGATGGGTTCTGATAATAATAATCTTCGCGTTGAGCTTTTGAAGCTTTTCGTATTCTTCCTTCTATTTCTTCACTTTCCTTCTTCTTCCTTCGCTGAGGTCTTTTTCGAAGAGAAATTCCAAGATGGATGGAAGAGTCGTTGGGTGTTATCTGATTGGAAAAGGAGTGAAGGGAAAGCTGGTACCTTTAAGCACACTGCAGGAAAATGGCCTGGTGATCCTGATGACAAAGGTTTGCAGACATATAATGATGCCAAGCACTATGCCATATCTGCAAAGATACCTGAGTTGAGCAACAAGAACAGGACTCTGGTTGTCCAGTATTCAATTAGGTTTGAGCAGGACATTGAGTGCGGAGGAGGTTACATTAAACTTCTTTCTGGTTATGTCAATCAGAAGAAGTTTGGTGGGGATACTCCTTACAGTTTGATGTTCGGACCAGATATATGTGGCTCACAGACGAAGAAGCTCCATCTTATACTATCATACCAAGGGCAGAATTACCCTATTAGAAAGGATCTACAATGTGAAACAGACAAATTGACTCATTTCTATACCTTTATTCTAAAGCCTGATGCATCTTATAGTGTCCTTGTTGACAACCGAGAAAGAGATTTTGGAAGCATGTACACAGATTGGGACATCCTTCCACCAAGGAAAATCAAGGATGTCAATGCGAAAAAGCCAGCAGACTGGGACGATAGAGAGTACATTGAAGATCCTAATGATGTCAAACCGGAGGGACATGATTCAATCCCAGCTGAAATTCCTGATCCAAAAGCCAAGAAGCCTGCTGACTGGGATGAGGACGAAGATGGGCTGTGGAAGCCCCCAAAAATTCCTAATCCAGCATACAGAGGACCATGGAAACGAAAGAAAATAAAAAACCCCAACTACAAGGGAAAATGGAAGATTCCATGGATTGATAACCCAGAATTTGAGGATGATCCTGATCTTTATGTGATGAAACCAGTCAAGTATGTGGGCATTGAAGTGTGGCAGGTGAAGGCTGGTTCAATTTTCGACAACATCTTAATCTGTGACGATCCACAATACGCAAGGCAAGTTGTGGAAGAATTTGTGGCTAATAATAAAGATGCTGAGAAAGAAGCTTTTGAAGAAGCAGAAAAGGAAAGAAGAGCGAGGGAAGAAGAGGAGGCACAAAGAGCTAGAGAAGAGGGCGAAAAAAAGAGAAGGGAGAGGGATCGTAAATATGGAGATAAGAGGCGACGTAGAAGGCCGGATCCCCATGACTACATGGATGATTACCACCATGATGAACTTTGA 1287 0.4227 MMGSDNNNLRVELLKLFVFFLLFLHFPSSSFAEVFFEEKFQDGWKSRWVLSDWKRSEGKAGTFKHTAGKWPGDPDDKGLQTYNDAKHYAISAKIPELSNKNRTLVVQYSIRFEQDIECGGGYIKLLSGYVNQKKFGGDTPYSLMFGPDICGSQTKKLHLILSYQGQNYPIRKDLQCETDKLTHFYTFILKPDASYSVLVDNRERDFGSMYTDWDILPPRKIKDVNAKKPADWDDREYIEDPNDVKPEGHDSIPAEIPDPKAKKPADWDEDEDGLWKPPKIPNPAYRGPWKRKKIKNPNYKGKWKIPWIDNPEFEDDPDLYVMKPVKYVGIEVWQVKAGSIFDNILICDDPQYARQVVEEFVANNKDAEKEAFEEAEKERRAREEEEAQRAREEGEKKRRERDRKYGDKRRRRRPDPHDYMDDYHHDEL* 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g3266 428 MobiDBLite consensus disorder prediction 364 428 - -
Aev04g3266 428 Pfam Calreticulin family 36 272 IPR001580 GO:0005509|GO:0005783|GO:0006457|GO:0051082
Aev04g3266 428 Pfam Calreticulin family 273 346 IPR001580 GO:0005509|GO:0005783|GO:0006457|GO:0051082
Aev04g3266 428 Coils Coil 358 402 - -
Aev04g3266 428 Gene3D Calreticulin/calnexin, P domain 208 327 IPR009033 GO:0005509|GO:0005515
Aev04g3266 428 SUPERFAMILY P-domain of calnexin/calreticulin 214 329 IPR009033 GO:0005509|GO:0005515
Aev04g3266 428 ProSitePatterns Calreticulin family signature 1. 111 126 IPR018124 GO:0005509
Aev04g3266 428 MobiDBLite consensus disorder prediction 232 276 - -
Aev04g3266 428 Gene3D - 33 389 - -
Aev04g3266 428 PANTHER CALRETICULIN AND CALNEXIN 14 428 IPR001580 GO:0005509|GO:0005783|GO:0006457|GO:0051082
Aev04g3266 428 SUPERFAMILY Concanavalin A-like lectins/glucanases 29 231 IPR013320 -
Aev04g3266 428 PANTHER CALRETICULIN-3 14 428 - -
Aev04g3266 428 MobiDBLite consensus disorder prediction 409 428 - -
Aev04g3266 428 MobiDBLite consensus disorder prediction 364 402 - -
Aev04g3266 428 MobiDBLite consensus disorder prediction 232 280 - -
Aev04g3266 428 PIRSF Calreticulin 12 428 IPR009169 GO:0005509|GO:0005783|GO:0006457|GO:0051082
Aev04g3266 428 ProSitePatterns Calreticulin family signature 2. 143 151 IPR018124 GO:0005509
Aev04g3266 428 PRINTS Calreticulin signature 228 241 IPR001580 GO:0005509|GO:0005783|GO:0006457|GO:0051082
Aev04g3266 428 PRINTS Calreticulin signature 256 278 IPR001580 GO:0005509|GO:0005783|GO:0006457|GO:0051082
Aev04g3266 428 PRINTS Calreticulin signature 139 155 IPR001580 GO:0005509|GO:0005783|GO:0006457|GO:0051082
Aev04g3266 428 PRINTS Calreticulin signature 327 347 IPR001580 GO:0005509|GO:0005783|GO:0006457|GO:0051082
Aev04g3266 428 PRINTS Calreticulin signature 113 131 IPR001580 GO:0005509|GO:0005783|GO:0006457|GO:0051082
Aev04g3266 428 PRINTS Calreticulin signature 294 313 IPR001580 GO:0005509|GO:0005783|GO:0006457|GO:0051082
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g3266 Aev-Chr4 31853170 31859525 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev04g3266 12 353 Miscellaneous Gene Families AT5G61790 35.013 5.82e-66 218
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g3266 K08057 - gmx:100802428 692.575