Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g3236 ATGGCATGCAAAGGCAATCTTCTCATTGTTGGTGGGATCATTGCTATTATGGTTATTGCAATGTGCACACACAGAGTTAATTGCATAGATGAGCTTTCAATTAAACCTGTTCTTGATGTTGCCTCACTCGATCGGACTAGTTTCCCTCCTGGTTTTATCTTTGGGGCTGGATCCTCATCCTACCAGTTTGAAGGAGCAGCAAATGAAGGTGGTAGAGAGCCAAGTGTATGGGATACCTTCACCCATAGATATCCAGATAAGATCCGTGATGGAAGCAATGGAGATGTGGCCATTGACTCATACCACCACATCAAGGAAGATGTTGGGATCATAAAGGATATGAACTTGGATTCATACAGATTCTCCATATCTTGGTCCAGAATTCTGCCAAAAGGAAAGCTAAGTGGAGGTGTTAATCAAGAAGGAATCAACTATTACAACTTCTTCATCAACGAGCTAGTAGCTAATGGAATAAAACCATTGGTGACACTCTTCCATTGGGATCTTCCACAAACCTTAGAAGATGAGTATGGTGGCTTCTTAAGCCCTCTCATAGTAAAAGATTTCCGGGACTATGCAGAAGTGTGCTTCAGGGAATTTGGAGACAGAGTAAAGAATTGGGTAACACTGAATGAGCCATGGAGTTACAGCCAAAATGGGTATGCGAATGGGAGAATGGCACCAGGTCGATGCTCTGCTTGGATGAACAAAAACTGCACTGGCGGTGATTCTGGCACTGAGCCTTATTTGGTCACTCACTACCAACTTCTTGCTCATGCTGCTGCTGTCAGACTTTACAGAGCCAAGTTTCAGGCTTCTCAAAAGGGTCTCATTGGCATTACATTGGTAGCAAATTGGTACACTCCATTCTCTGATTCTGCATCAGATCAAAAGGCTGCTGACAGAGCAATTGACTTCATGTATGGATGGTACATGGATCCACTCACATATGGTAATTATCCAAAAAGCATGCAATCTCTTGTGGGAGCAAGATTGCCAAAGTTCACAACAGAGCAATCAAAGCTAGTGAAGGGTTCATTTGATTTTATTGGGCTGAACTATTACTCAACTACCTATGCTTCTGATGCACCTCAATTAAGTAATGCAAGACCAAGCTACTTAACAGATTCTCTAGTTGATCCTGCATTTGAGCGTGATGGGAAGCCCATAGGCATAAAAATTGCTTCAGATTGGTTATATGTATATCCACGAGGAATTCGAGACCTTTTGTTATATACTAAGGACAAATATAACAACCCTGAGATTTACATCACTGAAAATGGTATAAATGAGTACAGTGATTCAACATTGTCATTGGAGGAATCTCTATTGGATAACTTTAGAATTGACTATCATTATCGTCATCTCTATTATCTACGATCTGCAATTAGGAATGGAGCGAATGTAAAAGGATATTATGTATGGTCATTGTTCGACAATTTCGAATGGTCATCTGGTTATACGGTTCGATTTGGAATGACATTTGTAGACTACAAAAATAATCTAAAAAGATATCCTAAACTGTCTGCATTATGGTACAAGAACTTCCTCAAGAAAGAAGCAAGACTTTATAGTTCTAGCCAGTAG 1587 0.4033 MACKGNLLIVGGIIAIMVIAMCTHRVNCIDELSIKPVLDVASLDRTSFPPGFIFGAGSSSYQFEGAANEGGREPSVWDTFTHRYPDKIRDGSNGDVAIDSYHHIKEDVGIIKDMNLDSYRFSISWSRILPKGKLSGGVNQEGINYYNFFINELVANGIKPLVTLFHWDLPQTLEDEYGGFLSPLIVKDFRDYAEVCFREFGDRVKNWVTLNEPWSYSQNGYANGRMAPGRCSAWMNKNCTGGDSGTEPYLVTHYQLLAHAAAVRLYRAKFQASQKGLIGITLVANWYTPFSDSASDQKAADRAIDFMYGWYMDPLTYGNYPKSMQSLVGARLPKFTTEQSKLVKGSFDFIGLNYYSTTYASDAPQLSNARPSYLTDSLVDPAFERDGKPIGIKIASDWLYVYPRGIRDLLLYTKDKYNNPEIYITENGINEYSDSTLSLEESLLDNFRIDYHYRHLYYLRSAIRNGANVKGYYVWSLFDNFEWSSGYTVRFGMTFVDYKNNLKRYPKLSALWYKNFLKKEARLYSSSQ* 529
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g3236 528 PANTHER GLYCOSYL HYDROLASE 11 524 IPR001360 GO:0004553|GO:0005975
Aev04g3236 528 PANTHER GLYCOSIDE HYDROLASE FAMILY 1 PROTEIN 11 524 - -
Aev04g3236 528 Gene3D Glycosidases 34 519 - -
Aev04g3236 528 PRINTS Glycosyl hydrolase family 1 signature 466 483 IPR001360 GO:0004553|GO:0005975
Aev04g3236 528 PRINTS Glycosyl hydrolase family 1 signature 445 456 IPR001360 GO:0004553|GO:0005975
Aev04g3236 528 PRINTS Glycosyl hydrolase family 1 signature 346 360 IPR001360 GO:0004553|GO:0005975
Aev04g3236 528 PRINTS Glycosyl hydrolase family 1 signature 422 430 IPR001360 GO:0004553|GO:0005975
Aev04g3236 528 PRINTS Glycosyl hydrolase family 1 signature 490 502 IPR001360 GO:0004553|GO:0005975
Aev04g3236 528 SUPERFAMILY (Trans)glycosidases 36 518 IPR017853 -
Aev04g3236 528 ProSitePatterns Glycosyl hydrolases family 1 active site. 422 430 IPR018120 -
Aev04g3236 528 ProSitePatterns Glycosyl hydrolases family 1 N-terminal signature. 52 66 IPR033132 -
Aev04g3236 528 Pfam Glycosyl hydrolase family 1 46 520 IPR001360 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g3236 Aev-Chr4 31629229 31632547 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev04g3236 26 513 Glycoside Hydrolase AT5G42260 55.624 0.0 573
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g3236 - K01188 gmx:100802250 894.804
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev10g1748 10 19535095 19541069 Aev04g3236 04 31629229 31632547 PCT