LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Aev04g3235	ATGGTGGGAAGAAAATGCTTTTTCATTGCTATTATGGTTATTGCAACAATAATAATGTGCACATGCAAAGTTAATTGCATGGATGCGGTTTCAGTTAAGCCCCTTCTTGATGTTGCTTCCCTCACTCGGAGCAGTTTCCCTCCCGGCTTTATCTTTGGGGCTGGATCTTCATCCTACCAATTTGAAGGTGCGGCAAAGGAAGGAGGTAGAGAAGCAAGTGTATGGGATACCTTCACCCATAGATACCCAAATAAAATAAGGGATGGGAGCAATGGAGATGTGGCCATTGACTCATACCACCACATCAAGGAAGATGTTGGAATCATAAGGGATATGAACTTAGATTCATACAGATTCTCCATATCTTGGTCAAGAATACTCCCAAAAGGAAAGCTAAGTGGAGGTGTTAATCAAGAAGGAATCAACTATTACAACAACTTCATCAACGAGCTAGTAGCTAATGGAATAAAACCATTGGTGACACTCTTCCATTGGGATCTTCCACAAACCTTAGAAGATGAGTATGGTGGCTTCTTAAGCCCTCCCATAGTAAAAGATTTCCGGGACTATGCAGAAGTGTGCTTCAGAGAATTCGGAGACAGAGTGAAATATTGGGTAACACTGAATGAGTCATGGAGTTACAGCCAAAATGGGTATGGAAATGGAAGAATGGCACCAGGTCGGTGCTCTGAATGGATGAATAAAAATTGCACTGGCGGTGACTCTTCCATTGAGCCTTATTTGGTTACACATTATCAACTTCTTGCTCATGCTGCTGCTGTCAGACTTTACAGAGCCAAGTTTCAGGCATCTCAAAAGGGTGAGATAGGGATAACATTGGTAGCAAATTGGTACATTCCACTCTCTGATTCTGCATCAGATCAAAAGGCTGCTGACAGAGCAATTGACTTCATGTATGGATGGTTTATGGATCCACTAACATCAGGGAACTATCCAAAAAGCATGCAATCTCTTGTTGGAAGAAGATTACCAAAGTTCACAACAGAGCAATCAAAGCTAGTGAAGGGTTCATTTGATTTCATTGGGTTGAACTATTACTCAACTACCTATGCTTCTGATGCACCTCAATTAAGTAATGCAAGACCAAGCTACACAACAGATTCTCTAGTTGATCCTGCATTTGAACGTGATGGGAAACCTATAGGCATAAAGATTGCTTCAGATTGGTTATATGTTTATCCAAGAGGAATCCGAGACCTTTTGTTATATACCAAGGAAAAGTACAATAATCCTGTGATTTACATAACTGAAAATGGTATAAATGAGTTCAATGATCAAACATTGTCACTTGAGGAGTCCCTTATGGATAATTTCAGAATTGACTATCATTATCGTCATCTTTATTACCTGCGATCTGCAATTAGGAAAGGTGTAAATGTAAAAGGATATTATGTATGGTCTTTGTTCGACAATTTTGAATGGTCGTCTGGTTTTAGTGTTCGATTTGGAATGATCTTTGTGGATTACAAGAATGATTTGAAGAGATATCTGAAACTTTCAGCACTATGGTACAAGGACTTTCTCAAGAAAGAGGCTAGACTCTATAGTTTTGGCAAATAA	1581	0.3947	MVGRKCFFIAIMVIATIIMCTCKVNCMDAVSVKPLLDVASLTRSSFPPGFIFGAGSSSYQFEGAAKEGGREASVWDTFTHRYPNKIRDGSNGDVAIDSYHHIKEDVGIIRDMNLDSYRFSISWSRILPKGKLSGGVNQEGINYYNNFINELVANGIKPLVTLFHWDLPQTLEDEYGGFLSPPIVKDFRDYAEVCFREFGDRVKYWVTLNESWSYSQNGYGNGRMAPGRCSEWMNKNCTGGDSSIEPYLVTHYQLLAHAAAVRLYRAKFQASQKGEIGITLVANWYIPLSDSASDQKAADRAIDFMYGWFMDPLTSGNYPKSMQSLVGRRLPKFTTEQSKLVKGSFDFIGLNYYSTTYASDAPQLSNARPSYTTDSLVDPAFERDGKPIGIKIASDWLYVYPRGIRDLLLYTKEKYNNPVIYITENGINEFNDQTLSLEESLMDNFRIDYHYRHLYYLRSAIRKGVNVKGYYVWSLFDNFEWSSGFSVRFGMIFVDYKNDLKRYLKLSALWYKDFLKKEARLYSFGK*	527

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Aev04g3235	526	PRINTS	Glycosyl hydrolase family 1 signature	443	454	IPR001360	GO:0004553\|GO:0005975
	Aev04g3235	526	PRINTS	Glycosyl hydrolase family 1 signature	488	500	IPR001360	GO:0004553\|GO:0005975
	Aev04g3235	526	PRINTS	Glycosyl hydrolase family 1 signature	344	358	IPR001360	GO:0004553\|GO:0005975
	Aev04g3235	526	PRINTS	Glycosyl hydrolase family 1 signature	464	481	IPR001360	GO:0004553\|GO:0005975
	Aev04g3235	526	PRINTS	Glycosyl hydrolase family 1 signature	420	428	IPR001360	GO:0004553\|GO:0005975
	Aev04g3235	526	PANTHER	GLYCOSYL HYDROLASE	8	522	IPR001360	GO:0004553\|GO:0005975
	Aev04g3235	526	PANTHER	GLYCOSIDE HYDROLASE FAMILY 1 PROTEIN	8	522	-	-
	Aev04g3235	526	Gene3D	Glycosidases	32	517	-	-
	Aev04g3235	526	Pfam	Glycosyl hydrolase family 1	44	518	IPR001360	GO:0004553\|GO:0005975
	Aev04g3235	526	ProSitePatterns	Glycosyl hydrolases family 1 N-terminal signature.	50	64	IPR033132	-
	Aev04g3235	526	SUPERFAMILY	(Trans)glycosidases	34	516	IPR017853	-
	Aev04g3235	526	ProSitePatterns	Glycosyl hydrolases family 1 active site.	420	428	IPR018120	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Aev04g3235	Aev-Chr4	31621803	31625953	Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Aev04g3235	5	511	Glycoside Hydrolase	AT5G42260	52.953	0.0	566

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Aev04g3235	-		K01188	gmx:100802250	892.493