Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g3233 ATGGCATTATTTATCTTCCATAGCTATCTAAGTTTTCTCCTCGTTGGTGTTTTGGCTATTGCTATTAGCTCTTCAGCTTCAACCATTGAAGCTCTTGTTGATGTTGCTTCTTTAAATCGGAGTAGTTTCCCACCAGGTTTCATCTTTGGCACTGCCTCCTCTTCCTATCAGTATGAAGGTGCTGCAAATGAAGGTGGGAGAGGACCAAGTACATGGGATACCTTAACTCATAAACACCCAGGAAGATGTTGGGATCATGAAATACATGAACACAGATTCTCCATATCTTGGTCAAGAATATTGCCAAAAGGAAAAATAAGCAGGGGTATAAATCAAGAAGGAATCAAATATTACAACAACCTCATCAATGAGCTACTGGTTAATGGTCTGCAACCATTTGTGACCCTTTTCCATTGGGATCTACCCCAAGCCTTAGAAGATGAGTACAAAGGCTTCTTCAGTCCTCATATTATAAAGGATTTTGAGGACTATGCAGAGCTCTGCTTCAAGGAATTTGGAGACAGAGTGAAGCATTGGATCACATTCAATGAGCCATGGAGCTATAGTTTGGGTATGGGTATGGATGAGCCCTACATATCCTCACACTACCAACTCCTTGCTCATGCTGCTTCTGTCCAAATTTACAAAACCAGATATCAGGCTTCTCAGAAAGGGCTAATAGGCATCACATTGAATTCCAACTGGTTCTTGCCTTTCTCAAACAACACATTAGACCACCAAGCTGCCCAAAGAGCTCTAGATTTCATGTTTGGATGGTTTATGGAACCACTAACAAGAGGAAAGTATCCAGAAAGCATGAGGACTTTGGTGGGAAGTCGATTACCAGAGTTCAGTGAAGAGCAATCAAAGCTACTTATAGGGTCATTTGATTTCATTGGACTCAATTACTACACAAGTAATTATGCTGCTCATATTCTACATGCAAATAATAATGACACAACCAAACCTAGCTATAACACGGATCATCAAGTCAATATGACAACTGAGCGTAATGGGATACCCATTGGACAAAGGGGTGCTTCATCTTGGCTATATGTTTATCCAAGGGGAATTAGGCAGTTACTTTTGTACACAAAGAGAGAATACAATAATCCTTTAATTTACATCACAGAAAATGGAATTGATGAGTTTAATGATCCAACGCTACCACTTCAAGAGGCCCTCATGGATATTTACAGAATTGATTATTATTATCGTCATCTTTATTATATTTTAACGGTAATCAAGAATGGTGTGAACATAAAAGGATATTTTGCATGGTCGCTATTGGACAACTTTGAATGGGGTAATGGCTATACAGTGCGTTTTGGGATTAATTTTGTCGATTACAAAGACAATTTAAAGAGATACCAAAAGCTCTCCGCCCATTGGTTTAGGAATTTTCTTAAAAAATATTAG 1419 0.3876 MALFIFHSYLSFLLVGVLAIAISSSASTIEALVDVASLNRSSFPPGFIFGTASSSYQYEGAANEGGRGPSTWDTLTHKHPGRCWDHEIHEHRFSISWSRILPKGKISRGINQEGIKYYNNLINELLVNGLQPFVTLFHWDLPQALEDEYKGFFSPHIIKDFEDYAELCFKEFGDRVKHWITFNEPWSYSLGMGMDEPYISSHYQLLAHAASVQIYKTRYQASQKGLIGITLNSNWFLPFSNNTLDHQAAQRALDFMFGWFMEPLTRGKYPESMRTLVGSRLPEFSEEQSKLLIGSFDFIGLNYYTSNYAAHILHANNNDTTKPSYNTDHQVNMTTERNGIPIGQRGASSWLYVYPRGIRQLLLYTKREYNNPLIYITENGIDEFNDPTLPLQEALMDIYRIDYYYRHLYYILTVIKNGVNIKGYFAWSLLDNFEWGNGYTVRFGINFVDYKDNLKRYQKLSAHWFRNFLKKY* 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g3233 472 SUPERFAMILY (Trans)glycosidases 32 470 IPR017853 -
Aev04g3233 472 Gene3D Glycosidases 22 471 - -
Aev04g3233 472 PRINTS Glycosyl hydrolase family 1 signature 418 435 IPR001360 GO:0004553|GO:0005975
Aev04g3233 472 PRINTS Glycosyl hydrolase family 1 signature 374 382 IPR001360 GO:0004553|GO:0005975
Aev04g3233 472 PRINTS Glycosyl hydrolase family 1 signature 295 309 IPR001360 GO:0004553|GO:0005975
Aev04g3233 472 PRINTS Glycosyl hydrolase family 1 signature 442 454 IPR001360 GO:0004553|GO:0005975
Aev04g3233 472 PRINTS Glycosyl hydrolase family 1 signature 397 408 IPR001360 GO:0004553|GO:0005975
Aev04g3233 472 PANTHER GLYCOSYL HYDROLASE 90 471 IPR001360 GO:0004553|GO:0005975
Aev04g3233 472 PANTHER GLYCOSYL HYDROLASE 11 85 IPR001360 GO:0004553|GO:0005975
Aev04g3233 472 Pfam Glycosyl hydrolase family 1 41 87 IPR001360 GO:0004553|GO:0005975
Aev04g3233 472 Pfam Glycosyl hydrolase family 1 88 471 IPR001360 GO:0004553|GO:0005975
Aev04g3233 472 ProSitePatterns Glycosyl hydrolases family 1 N-terminal signature. 47 61 IPR033132 -
Aev04g3233 472 PANTHER BETA-GLUCOSIDASE, PUTATIVE-RELATED 90 471 - -
Aev04g3233 472 PANTHER BETA-GLUCOSIDASE, PUTATIVE-RELATED 11 85 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g3233 Aev-Chr4 31604071 31607909 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev04g3233 9 471 Glycoside Hydrolase AT5G44640 47.451 1.64e-165 475
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g3233 - K01188 gmx:100785608 712.605