Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g3172 ATGGGAGAGGCAAAAATTGGTGGTAGAGGAAACAATAGTAGGTGGTCTTTAGAAGGGATGACAGCTCTAGTCACTGGTGGATCCAAAGGAATCGGGTACGGTATCGTGGAAGAGTTGGCAGAGTTAGGGGCCAAAGTACACACATGTGCTAGGAACTCAACTCAACTCAATGAATCCTTACATCAATGGACCACAAAGGGATATAAAGTTAGTGGTTCAATCTGTGATTTGACCTCTCGTGCACAGAGAGAGGAGCTCATAGCAAGAGTCTCTTCTGAGTTTAATGGCAAACTCAACATACTAGTGAACAATGTTGGAACAAACATATGGAAACAGAGCACAGAGTTCACAGAAGAAGATTTCTCATATCTAGTGAGCACGAATCTTGAATCTGCTTTCCACATAAGCCAGCTTGCACATCCTCTCCTTAAAGCTTCTGAGTCTGCAAGCATCATTTTCATATCCTCCATCGCTTCTGTCGTCTCAATAGATATAGGATCCATATATAGTGCAACAAAAGGAGCAATCAACCAACTCACAAGGAATTTAGCTTGTGAATGGGCAAAGGATAATATAAGGAGTAATTGCATTGCACCAGGGCTAATCAATACGCCTCTTGCTGATAGGCACCTAACAGATGAAAGACTCTTGAATGGTTTTATATCACGAACTCCTCTTGGAAGGATTGGAGAGACAGAGGAGGTGTCTCCATTGGTGGCATTCCTTTGCATGCCTTCAGCATCTTTCATCACAGGACAAACCATTTGTGTTGATGGAGGCTTAACTGTCAATGGTCTCCTTCTATGA 807 0.4275 MGEAKIGGRGNNSRWSLEGMTALVTGGSKGIGYGIVEELAELGAKVHTCARNSTQLNESLHQWTTKGYKVSGSICDLTSRAQREELIARVSSEFNGKLNILVNNVGTNIWKQSTEFTEEDFSYLVSTNLESAFHISQLAHPLLKASESASIIFISSIASVVSIDIGSIYSATKGAINQLTRNLACEWAKDNIRSNCIAPGLINTPLADRHLTDERLLNGFISRTPLGRIGETEEVSPLVAFLCMPSASFITGQTICVDGGLTVNGLLL* 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g3172 268 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 149 157 IPR002347 -
Aev04g3172 268 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 96 107 IPR002347 -
Aev04g3172 268 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 169 188 IPR002347 -
Aev04g3172 268 Gene3D - 6 266 - -
Aev04g3172 268 PANTHER NAD(P)-BINDING ROSSMANN-FOLD PROTEIN 11 267 - -
Aev04g3172 268 Pfam Enoyl-(Acyl carrier protein) reductase 28 262 - -
Aev04g3172 268 PANTHER TROPINONE REDUCTASE 11 267 IPR045000 GO:0016491
Aev04g3172 268 ProSitePatterns Short-chain dehydrogenases/reductases family signature. 156 184 IPR020904 GO:0016491
Aev04g3172 268 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 18 263 IPR036291 -
Aev04g3172 268 PRINTS Glucose/ribitol dehydrogenase family signature 169 188 IPR002347 -
Aev04g3172 268 PRINTS Glucose/ribitol dehydrogenase family signature 225 245 IPR002347 -
Aev04g3172 268 PRINTS Glucose/ribitol dehydrogenase family signature 96 107 IPR002347 -
Aev04g3172 268 PRINTS Glucose/ribitol dehydrogenase family signature 143 159 IPR002347 -
Aev04g3172 268 PRINTS Glucose/ribitol dehydrogenase family signature 21 38 IPR002347 -
Aev04g3172 268 PRINTS Glucose/ribitol dehydrogenase family signature 190 207 IPR002347 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g3172 Aev-Chr4 31194545 31197345 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev04g3172 12 266 Miscellaneous Gene Families AT2G29290 65.882 1.29e-123 351
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g3172 K08081 - gmx:100780806 396.741
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev04g3172 04 31194545 31197345 Aev04g3172 04 31194545 31197345 ECH