Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g3170 ATGCATCAAGCTTCTCTCTGTCCTGCTCTCCAAATTCCATCCCCATCACTGTCAACGAGCTACACTGATTCTACTCTTCTTTCCAACATTGGAAGATCACATTTCATTCTCATTAGACCCATTAGCATTAGGAGGATCCAACCAATGTTACAATGTTCCCGCAACAACACCCCAACAACAACACATCACAGCATCAACAAGTGGTCTCTCCGAGGAATGACAGCACTTGTCACAGGTGGAACACGCGGAATCGGGCACGCCATTGTGGAGGAACTGGTGGGATTTGGGGCAAGAGTGCACACGTGTGCAAGGAATGAGAATGAGCTCAGCACGTGCCTTAAGGAATGGAATGATTCGGGTTTTGATGTTACTGGGTCGGTTTGTGATGTATCAGTTCCACAGCAGAGGGAGGAATTGTTGAAGGATGTGTGTTCTGTATTTCAGGGGAAACTCAACATTCTTGTTAACAATGTAGGAACAAACATTAGAAAACCAATGACAGACTTCACAACTGCAGAGTTTTCCAGTCTCATTGATACCAATTTAGGATCCACCTTTCATATATGTCAACTTGCTTATCCACTTCTGAAAGCATCGGGAGCAGGAAGTGTTGTATTTATCTCTTCTGTTTCCGGTTTTGTCTCCCTGAAGTCAATGTCTGTTCAAGGAGCAACAAAAGGGGCGATTAATCAACTCACAAGGAATCTAGCTTGCGAGTGGGCTAAAGACAATATAAGGAGTAATGCAGTAGCTCCTTGGTACATCAAAACCTCAATGGTGGAACAAGTGCTCAGCAACAAAGACTATCTGGAAGAGGTGTACTCTCGGACCCCTCTTCGGCGCCTAGGAGATCCGGCGGAAGTCTCTTCTCTTGTCGCCTTTCTGTGCTTACCGGCATCATCATACATCACTGGCCAGATAATATGTGTTGATGGAGGAATGACCATAAATGGATTCTACCCAAATCACATGTATGGTATTGTGGAAGAGTTGGCACAGCTTGGAGCAAGAGTACACACTTGCTCAAGGAACGAAGATCAACTCAATGAATCCTTGCAGCAATGGACCACAAAGGGATACCGAGTTACTGGTTCAGTCTGTGATATGGCCTCTCGCGAACAGAGAGAGGAACTCATAGCTAGAGTCTCTTCTGAGTTTAATGGCAAACTCAACATCCTTGTAAACAATGTTGGAGCAAACATATGGAAACAGACCACAGAATTCACAGAGGAAGATTTCTCATACCTAGTGAGCACGAATCTTGAATCTGGTTTCCACATAAGCCAGCTTGCACATCCTCTCCTTAAAGCTTCTGAGGCTTCAAGCATCGTTTTCATATCTTCCATTGCCGGTGTGCTATCAGTAGATATAGGATCCATATATGGTGCAACAAAAGGAGCAATTAACCAACTTACGAAAAATTTAGCAAGTGAGTGGGCAAAAGATAATATAAGGACTAATTGCGTTGCACCCGGATCAATCAGAACCCCTGCTGTTGATAACCACCTAAAAGATGAAATTTTTTTGAATGGTTTTATATCACGAACTCCTCTTGGGAGAATTGGAGAGACAGAGGAGGTGTCTTCATTGGTGGCATTCCTTTGCATGCCTTCAGCATCTTTCATCACAGGACAAACCATTTGTGTTGATGGAGGCTTAACTGTTAGTGGTGTCTCTTTCTAA 1683 0.4385 MHQASLCPALQIPSPSLSTSYTDSTLLSNIGRSHFILIRPISIRRIQPMLQCSRNNTPTTTHHSINKWSLRGMTALVTGGTRGIGHAIVEELVGFGARVHTCARNENELSTCLKEWNDSGFDVTGSVCDVSVPQQREELLKDVCSVFQGKLNILVNNVGTNIRKPMTDFTTAEFSSLIDTNLGSTFHICQLAYPLLKASGAGSVVFISSVSGFVSLKSMSVQGATKGAINQLTRNLACEWAKDNIRSNAVAPWYIKTSMVEQVLSNKDYLEEVYSRTPLRRLGDPAEVSSLVAFLCLPASSYITGQIICVDGGMTINGFYPNHMYGIVEELAQLGARVHTCSRNEDQLNESLQQWTTKGYRVTGSVCDMASREQREELIARVSSEFNGKLNILVNNVGANIWKQTTEFTEEDFSYLVSTNLESGFHISQLAHPLLKASEASSIVFISSIAGVLSVDIGSIYGATKGAINQLTKNLASEWAKDNIRTNCVAPGSIRTPAVDNHLKDEIFLNGFISRTPLGRIGETEEVSSLVAFLCMPSASFITGQTICVDGGLTVSGVSF* 561
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g3170 560 Gene3D - 325 557 - -
Aev04g3170 560 Gene3D - 63 318 - -
Aev04g3170 560 PANTHER TROPINONE REDUCTASE-LIKE PROTEIN, CHLOROPLASTIC 45 323 - -
Aev04g3170 560 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 326 555 IPR036291 -
Aev04g3170 560 PRINTS Glucose/ribitol dehydrogenase family signature 222 241 IPR002347 -
Aev04g3170 560 PRINTS Glucose/ribitol dehydrogenase family signature 196 212 IPR002347 -
Aev04g3170 560 PRINTS Glucose/ribitol dehydrogenase family signature 243 260 IPR002347 -
Aev04g3170 560 PRINTS Glucose/ribitol dehydrogenase family signature 278 298 IPR002347 -
Aev04g3170 560 PRINTS Glucose/ribitol dehydrogenase family signature 149 160 IPR002347 -
Aev04g3170 560 PRINTS Glucose/ribitol dehydrogenase family signature 74 91 IPR002347 -
Aev04g3170 560 ProSitePatterns Short-chain dehydrogenases/reductases family signature. 448 476 IPR020904 GO:0016491
Aev04g3170 560 PANTHER TROPINONE REDUCTASE 326 558 IPR045000 GO:0016491
Aev04g3170 560 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 461 480 IPR002347 -
Aev04g3170 560 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 202 210 IPR002347 -
Aev04g3170 560 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 149 160 IPR002347 -
Aev04g3170 560 Pfam Enoyl-(Acyl carrier protein) reductase 81 315 - -
Aev04g3170 560 Pfam Enoyl-(Acyl carrier protein) reductase 325 554 - -
Aev04g3170 560 PANTHER TROPINONE REDUCTASE-LIKE PROTEIN, CHLOROPLASTIC 326 558 - -
Aev04g3170 560 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 72 317 IPR036291 -
Aev04g3170 560 PANTHER TROPINONE REDUCTASE 45 323 IPR045000 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g3170 Aev-Chr4 31180099 31185992 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev04g3170 327 560 Miscellaneous Gene Families AT2G29290 63.675 1.00e-102 308
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g3170 K08081 - pvy:116134377 551.206
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev04g3170 04 31180099 31185992 Aev04g3170 04 31180099 31185992 ECH