Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g3157 ATGATCTTGTCAAGGATTGGGCGCTCCCTGTCGCGCTCTTCACGAGCTAAAAATTTGTTGCGAGGTGATGCGAAATTGGGAACCCTTATTGGAGCAGCGTCGCGCGCGAATGCACATTCCGTGGGAGAGGAATTGGGATTAGGGTTTTTCAGGGGATATGTTGCTTCTGCTAGAGCTCGTGCAAACGGCGTCGTTTCGAAGTTGCCCGATATTAAGTCTGTTGGTGCAAACCCTAGGATTCATCACCGCCTCTTTTCCGGCGAAGCTCCTAAGAAGAAGAATTATGAGAACTTCTACCCCAAGGAGAAGAAGGAAATTCCAAAGGGAAATGGTAAAAAGTCCGAGTCTAAAGATGAGTCAAACACAAACACAGATGATCATGGGAGTTTTCAGGACTTCTTCATCAAGCAATTTCAAAATCTAGCCACCCCGTTAATGGTGGTGGGGCTATTTCTTATGTCCTCTGCCTTTAGTCCTCGTGAGCAGCAGCAGATTAGCTTTCAGGAGTTCAAAAACAAGCTTTTGGAACCAGGACTAGTCGATCATATTGTTGTTTCAAACAAGTCAGTTGCCAAAATATATGTGAGGAATACTCCCCGTAACCAAACAGACAGTGAAGTTGTCCAAGGAACCGTCCCTGCAAAGGGAACTGGTGGCCAATATAAATATTATTTCAATATTGGGAGTGTTGAGTCTTTTGAGGAGAAGTTAGAGGAAGCACAAGAAGCACTAGGCATTGACCCACATGATTATGTCCCTGTTACATATTCTTCTGAAATGGTTTGGTACCAGGAATTGATGAGATTTGCTCCAACATTGTTGCTTTTGGGATCTCTCTTATATATGGGAAGGAGAATGCAAGGTGGACTTGGTGTTGGTGGTGGTGGGGGTGGTAAGGGTGCTCGAGGAATATTCAACATAGGAAAAGCCCATGTTACTAAAGTGGACAAAAATGCCAAAAACAAGGTCTTTTTTAAAGATGTTGCTGGCTGTGATGAAGCAAAGCAAGAAATTATGGAGTTTGTCCACTTCCTCAAGAACCCAAAGAAATATGAAGAACTAGGGGCAAAAATCCCCAAAGGTGCTCTTCTAGTGGGTCCTCCAGGCACAGGAAAAACCCTTTTAGCTAAAGCCACTGCAGGGGAATCTGGTGTGCCATTCCTTTCTATATCTGGTTCTGATTTCATGGAAATGTTTGTTGGTGTTGGACCATCTAGGGTGAGAAACTTGTTTCAGGAAGCAAGGCAGTGTGCTCCCAGTATAATATTTATTGATGAAATTGATGCAATTGGTCGAGCAAGGGGGCGTGGAGGTTTCTCTGGTGCAAATGATGAGCGTGAAAGTACGTTAAATCAATTGTTGGTGGAGATGGATGGTTTTGGAACTACTACTGGGGTTGTTGTACTTGCAGGAACAAATAGACCTGATATCTTAGATAAAGCACTACTTAGGCCTGGGCGATTTGATCGCCAGATAAGCATTGATAAACCTGATATCAAGGGCCGTGACCAGATATTCCAGATTTACTTGAAAAAGATCAAACTTGATCATGAGCCTTCATATTATTCGCAAAGGCTTGCGGCCCTTACACCAGGATTTGCTGGAGCGGACATTGCTAATGTTTGCAATGAAGCTGCTCTGATTGCCGCAAGAGGCGAGCAAACTCAAGTGACAATGGAACATTTTGAGGCAGCTATTGATAGGATCATTGGTGGTTTGGAGAAGAAGAACCGGGTAATAAGCAAGCTGGAAAGGCGTACCGTTGCTTACCATGAATCAGGCCATGCCGTTGCTGGCTGGTTCTTGGAGCATGCTGAACCCTTGTTGAAAGTAACTATAGTTCCTCGTGGTACAGCAGCTCTTGGGTTTGCCCAGTATGTTCCAAATGAGAACCTTCTCATGACAAAGGAGCAGCTCTTTGATATGACTTGTATGACCCTCGGTGGTCGTGCTGCTGAGCAGGTTCTCATCGGGAAAATCTCAACAGGAGCACAAAATGACTTGGAAAAAGTGACCAAGATGACCTATGCCCAGGTAGCGGTCTACGGTTTCAGCGACAAAGTTGGTCTCCTCTCTTTCCCTCCAAGAGAGGACTCCTTCGAGATGAGCAAACCATACAGCAGCAAGACCGCCGCCATCATCGATAATGAAGTACGAGAATGGGTGAGCAAAGCTTATGAGCGCACCGTAGAGCTCATCGAGGAACACAAGGAGCAAGTTGCTCAGATTGCAGAGATGCTGCTCGAAAAAGAAGTTCTTCACCAGGACGACTTGCTTCGAGTTTTGGGCGAGCGACCGTTCAAGTCTCTTGAGCCCACCAATTATGACAGATTCAAGCAAGGTTTTCAAGAGGTTGAGGAGAAGGTTGTAGAAAACACTGTGGAAGGCCCTGAGGAAAGTGGTGGTGGTTCATCTTTAGAGCCCCAGGTTGTTCCCACATAG 2442 0.4545 MILSRIGRSLSRSSRAKNLLRGDAKLGTLIGAASRANAHSVGEELGLGFFRGYVASARARANGVVSKLPDIKSVGANPRIHHRLFSGEAPKKKNYENFYPKEKKEIPKGNGKKSESKDESNTNTDDHGSFQDFFIKQFQNLATPLMVVGLFLMSSAFSPREQQQISFQEFKNKLLEPGLVDHIVVSNKSVAKIYVRNTPRNQTDSEVVQGTVPAKGTGGQYKYYFNIGSVESFEEKLEEAQEALGIDPHDYVPVTYSSEMVWYQELMRFAPTLLLLGSLLYMGRRMQGGLGVGGGGGGKGARGIFNIGKAHVTKVDKNAKNKVFFKDVAGCDEAKQEIMEFVHFLKNPKKYEELGAKIPKGALLVGPPGTGKTLLAKATAGESGVPFLSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIIFIDEIDAIGRARGRGGFSGANDERESTLNQLLVEMDGFGTTTGVVVLAGTNRPDILDKALLRPGRFDRQISIDKPDIKGRDQIFQIYLKKIKLDHEPSYYSQRLAALTPGFAGADIANVCNEAALIAARGEQTQVTMEHFEAAIDRIIGGLEKKNRVISKLERRTVAYHESGHAVAGWFLEHAEPLLKVTIVPRGTAALGFAQYVPNENLLMTKEQLFDMTCMTLGGRAAEQVLIGKISTGAQNDLEKVTKMTYAQVAVYGFSDKVGLLSFPPREDSFEMSKPYSSKTAAIIDNEVREWVSKAYERTVELIEEHKEQVAQIAEMLLEKEVLHQDDLLRVLGERPFKSLEPTNYDRFKQGFQEVEEKVVENTVEGPEESGGGSSLEPQVVPT* 814
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g3157 813 Hamap ATP-dependent zinc metalloprotease FtsH [ftsH]. 12 800 IPR005936 GO:0004176|GO:0004222|GO:0016020
Aev04g3157 813 Pfam AAA+ lid domain 525 564 IPR041569 -
Aev04g3157 813 Gene3D - 152 261 - -
Aev04g3157 813 PANTHER ATP-DEPENDENT PROTEASE 36 812 - -
Aev04g3157 813 ProSitePatterns AAA-protein family signature. 466 484 IPR003960 GO:0005524|GO:0016887
Aev04g3157 813 SMART AAA_5 358 498 IPR003593 -
Aev04g3157 813 Pfam FtsH Extracellular 147 249 IPR011546 GO:0004176|GO:0004222|GO:0005524|GO:0008270|GO:0016021
Aev04g3157 813 Gene3D - 497 573 - -
Aev04g3157 813 MobiDBLite consensus disorder prediction 96 125 - -
Aev04g3157 813 SUPERFAMILY FtsH protease domain-like 579 770 IPR037219 GO:0004176|GO:0004222|GO:0005524|GO:0006508
Aev04g3157 813 Gene3D - 306 495 IPR027417 -
Aev04g3157 813 Pfam ATPase family associated with various cellular activities (AAA) 363 495 IPR003959 GO:0005524|GO:0016887
Aev04g3157 813 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 322 569 IPR027417 -
Aev04g3157 813 Gene3D Peptidase M41 579 779 IPR037219 GO:0004176|GO:0004222|GO:0005524|GO:0006508
Aev04g3157 813 MobiDBLite consensus disorder prediction 96 126 - -
Aev04g3157 813 Pfam Peptidase family M41 578 760 IPR000642 GO:0004176|GO:0004222|GO:0005524|GO:0006508
Aev04g3157 813 PANTHER ATP-DEPENDENT ZINC METALLOPROTEASE FTSH 10, MITOCHONDRIAL-LIKE 36 812 - -
Aev04g3157 813 CDD AAA 359 496 - -
Aev04g3157 813 TIGRFAM FtsH_fam: ATP-dependent metallopeptidase HflB 262 762 IPR005936 GO:0004176|GO:0004222|GO:0016020
Aev04g3157 813 MobiDBLite consensus disorder prediction 791 813 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g3157 Aev-Chr4 31111623 31116812 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev04g3157 1 813 Miscellaneous Gene Families AT2G29080 76.549 0.0 1186
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g3157 K08956 - gmx:100806656 1332.39