Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g3109 ATGGCACCGAAGGCAGAGAAGAAGCCAGCTGAGAAGAAGCCCGCAGAGGAGAAGAAGACCGTGGCGGAGAAAGCTCCACCGGCGGAGAAGAAGCCAAAGGCAGGGAAGAAGCTCCCTAAGGAAGGTGCCGCTGCCGCCGGAGACAAGAAGAAAAAGAGAACGAAGAAAAGCGTTGAGACCTACAAGATCTACATCTTCAAGGTTCTGAAGCAGGTTCACCCTGACATCGGTATCTCTAGCAAGGCCATGGGAATCATGAACAGTTTCATCAACGACATCTTCGAGAAGCTTGCACAGGAAGCTTCTAGACTCGCTCGCTACAACAAGAAGCCAACTATTACCTCCAGGGAAATCCAGACCGCAGTCAGGCTTGTGCTGCCCGGAGAGTTGGCCAAGCACGCTGTGTCTGAGGGAACTAAGGCTGTTACCAAATTCACAAGCTCTTAA 447 0.519 MAPKAEKKPAEKKPAEEKKTVAEKAPPAEKKPKAGKKLPKEGAAAAGDKKKKRTKKSVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS* 149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g3109 148 MobiDBLite consensus disorder prediction 1 56 - -
Aev04g3109 148 PRINTS Histone H2B signature 132 145 IPR000558 GO:0000786|GO:0003677|GO:0030527
Aev04g3109 148 PRINTS Histone H2B signature 61 79 IPR000558 GO:0000786|GO:0003677|GO:0030527
Aev04g3109 148 PRINTS Histone H2B signature 80 100 IPR000558 GO:0000786|GO:0003677|GO:0030527
Aev04g3109 148 PRINTS Histone H2B signature 102 119 IPR000558 GO:0000786|GO:0003677|GO:0030527
Aev04g3109 148 PRINTS Histone H2B signature 119 132 IPR000558 GO:0000786|GO:0003677|GO:0030527
Aev04g3109 148 PANTHER HISTONE H2B 5 148 - -
Aev04g3109 148 Gene3D Histone, subunit A 23 148 IPR009072 GO:0046982
Aev04g3109 148 ProSitePatterns Histone H2B signature. 116 138 IPR000558 GO:0000786|GO:0003677|GO:0030527
Aev04g3109 148 Pfam Core histone H2A/H2B/H3/H4 1 124 IPR007125 GO:0003677
Aev04g3109 148 SMART h2b3 51 147 IPR000558 GO:0000786|GO:0003677|GO:0030527
Aev04g3109 148 PANTHER HISTONE H2B 5 148 IPR000558 GO:0000786|GO:0003677|GO:0030527
Aev04g3109 148 SUPERFAMILY Histone-fold 32 148 IPR009072 GO:0046982
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g3109 Aev-Chr4 30781673 30782119 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g3109 K11252 - vvi:100248346 195.667
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev04g3109 04 30781673 30782119 Aev04g3109 04 30781673 30782119 ECH