LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Aev04g3048	ATGGCAGCGTCGCGAATAATATCCCATCACCACCGTCCATCATTCCCTCCTCAATCTCCGCCGTCAGATACCAATCATTCCTTTCCCTCCTCCATCAACCTCAAGCTCCACCCAAAACGGTGCCGTATCGCCTGCGTTCGCGCTTCACTCCGCGCCCACAAGGAGAACGATCTCAACGACAAAGCTCGCTCCCTCGAATTCAATGAAGCTCAACGACACCACAACGACGTCGTTTCCAAAGATCTCCTCTCTCTTCCCCGGCCTTTGACGTCGACACAACTCTCTGGTTCAGTTTCCGATGGTTCCCGCCTTCGTGTTGCATATCAGGGGGTTCGTGGTGCTTACAGTGAGTCAGCTGCACAGAAGGCGTACCCGAATTGTGAAGCTGTGCCTTGTGAACAATTTGATACTGCTTTTGAAGCTGTTGAAAGGTGGCTTGTGGACAGAGCAGTTTTGCCAATTGAGAATTCTTTAGGAGGGAGCATCCACAGAAATTATGACCTTTTACTCAGGCACAGGTTGCATATAGTAGGGGAAGTGAAATTTGCAGTCCACCATTGTCTGATGGCCAATCATGGTGTTAGACTCGAGGATTTGAAGCGGGTTCTTAGTCATCCACAGGCTCTTGCACAATGTGAGATCACCCTGACAAAGTTGGGATTGGTTAGAGAAGCAGTTGATGATACAGCTGGTGCTGCAAAGCATATTGCCTTCCACAAAGTACAAGATGCAGGAGCTGTTGCTAGCTCCGCAGCTGCAGAGATCTATGGCTTGAATATACTTGCTCAAGACATTCAGGATGATTGCGATAATGTCACCCGATTTCTTATACTAGCACGAGAACCTATAATTCCGGGCACAGATAGACCATTTAAGACAAGCATAGTTTTTTCTTTGGAGGAGGGTCCTGGGGTCCTTTTCAAGGCCCTAGCTGTGTTTGCTCTGCGTCAAATTAACCTAACAAAGATTGAAAGCCGTCCTTTGCGGAAGAATCCTCTACGAGGGTCCGATGACAACAACAAGTACTTTGACTATCTTTTTTATGTTGATTTTGATGCGTCAATGGCTCATCCGGATGCACAAAATGCTTTGAGGCATCTAAATGAGTTCGCTACGTTCTTGCGAGTGCTAGGGAGTTATCCTTTGGACACTACTAGCATGGCGTAA	1167	0.4756	MAASRIISHHHRPSFPPQSPPSDTNHSFPSSINLKLHPKRCRIACVRASLRAHKENDLNDKARSLEFNEAQRHHNDVVSKDLLSLPRPLTSTQLSGSVSDGSRLRVAYQGVRGAYSESAAQKAYPNCEAVPCEQFDTAFEAVERWLVDRAVLPIENSLGGSIHRNYDLLLRHRLHIVGEVKFAVHHCLMANHGVRLEDLKRVLSHPQALAQCEITLTKLGLVREAVDDTAGAAKHIAFHKVQDAGAVASSAAAEIYGLNILAQDIQDDCDNVTRFLILAREPIIPGTDRPFKTSIVFSLEEGPGVLFKALAVFALRQINLTKIESRPLRKNPLRGSDDNNKYFDYLFYVDFDASMAHPDAQNALRHLNEFATFLRVLGSYPLDTTSMA*	389

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Aev04g3048	388	ProSitePatterns	Prephenate dehydratase signature 1.	256	278	IPR018528	GO:0004664\|GO:0009094
	Aev04g3048	388	SUPERFAMILY	ACT-like	275	382	IPR045865	-
	Aev04g3048	388	ProSiteProfiles	Prephenate dehydratase domain profile.	105	280	IPR001086	GO:0004664\|GO:0009094
	Aev04g3048	388	Pfam	Prephenate dehydratase	106	282	IPR001086	GO:0004664\|GO:0009094
	Aev04g3048	388	PANTHER	PREPHENATE DEHYDRATASE P PROTEIN	33	386	-	-
	Aev04g3048	388	Gene3D	-	100	188	-	-
	Aev04g3048	388	MobiDBLite	consensus disorder prediction	1	31	-	-
	Aev04g3048	388	PANTHER	AROGENATE DEHYDRATASE	33	386	-	-
	Aev04g3048	388	Gene3D	-	287	384	-	-
	Aev04g3048	388	CDD	PBP2_Ct-PDT_like	105	282	-	-
	Aev04g3048	388	ProSitePatterns	Prephenate dehydratase signature 2.	320	327	IPR018528	GO:0004664\|GO:0009094
	Aev04g3048	388	Gene3D	-	189	268	-	-
	Aev04g3048	388	ProSiteProfiles	ACT domain profile.	294	381	IPR002912	-
	Aev04g3048	388	SUPERFAMILY	Periplasmic binding protein-like II	105	286	-	-
	Aev04g3048	388	CDD	ACT_CM-PDT	292	381	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Aev04g3048	Aev-Chr4	30233422	30236630	Dispersed/Transposed

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Aev04g3048	K05359		-	gmx:100787387	590.497

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Aev04g3048	04	30233422	30236630	Aev04g3048	04	30233422	30236630	ECH