Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g3027 ATGAAGATCACCCAATTGATCAACCAACTCAACTCCCAGCTCATCACCATCAAGACCGGCGGTCTAACCATCCTTGCGCCGGACGACGCCGCCTTCTCAGAGCTAAAAGCAGGGTTCCTCAACTCCCTGTCTGATGGGCAGAAGCTAGAGCTGATGCAGTTCCATGTGATATCAGACTATGTGGCAAGCTCAAACTTTGACACACTGACAAACCCTGTGAGGACACTGGCTGGAGCCAAACCAGGAAAAGTGGAACTGAATGTGATAAGTTATGGAGGCAGTGTGAACATCTCAACTGGGGCAGTTAACACTACCATCAATGGCATTATATACACTGATAAGCACCTTGCTATCTACAAGGTTGCTAAGGTCCTTCTCCCTTTGGACTTCTTCACTGTTTCTAAGGCTCCTGCTAAGGCTCCTTCTCTGGCTCCTCAACCTTCTTCTGCTGATGCTGCAAAAGCTCCTAAGGCTGATAAGGACACTGCAACTTCCTCTGACTCATCAGAGGTTAATCCCACAACAGAGAGCTCTGGCAATGTCAAAATCAGTGTGGTTGGAAAGTGGGTGTCCCTTGTTCTTGGAGTAGTTCTCATGACTATATTGAGAAACTAA 615 0.4748 MKITQLINQLNSQLITIKTGGLTILAPDDAAFSELKAGFLNSLSDGQKLELMQFHVISDYVASSNFDTLTNPVRTLAGAKPGKVELNVISYGGSVNISTGAVNTTINGIIYTDKHLAIYKVAKVLLPLDFFTVSKAPAKAPSLAPQPSSADAAKAPKADKDTATSSDSSEVNPTTESSGNVKISVVGKWVSLVLGVVLMTILRN* 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g3027 204 Gene3D FAS1 domain 2 127 IPR036378 -
Aev04g3027 204 Pfam Fasciclin domain 5 127 IPR000782 -
Aev04g3027 204 SMART fasc_3 23 128 IPR000782 -
Aev04g3027 204 MobiDBLite consensus disorder prediction 139 178 - -
Aev04g3027 204 ProSiteProfiles FAS1/BIgH3 domain profile. 1 125 IPR000782 -
Aev04g3027 204 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 1 201 - -
Aev04g3027 204 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 1 201 IPR045003 -
Aev04g3027 204 SUPERFAMILY FAS1 domain 4 128 IPR036378 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g3027 Aev-Chr4 30010565 30011179 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g3027 - - gmx:100794280 285.804
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev04g3027 04 30010565 30011179 Aev04g3027 04 30010565 30011179 ECH