Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g3005 ATGGACTCCTCCTCCAGCTCTTCCGCCTCCGACACTGACTCCCAAACTCCGCCGCCGCTGCTACCTGAATCCCTGCTCCACTCCGGCGCCGAATCGAACGCTTCTGCCGGCGGATCCGTGACGGTTGAGCTGTTCGTGGATGAAGGCGAGGTTGGACCGGGAGAGGTTAGGGTCTCGATCGAACCCGGTTCGAGCGAGGTTACGTCATCAGAGAGGACGAGAATCGGTTCGGAGCTCGAACCGGAGGCTCCGTCGAGCCCAAGCAGCGGTGGTTACGCTGGAGAGATAGGTAGCAGCAGCAGTAGCGACACCAGCGGTTCGCAAATTGTACCAATCGAGCGTGAAATTGAAGACATGAGGATCGAAGTCGACGACACTCTCCGTGGAATCTCCGATCCCGAAACGACATGGATTCCCGGGAAACGACATCTCGATGAGGATGATGCTTCCATTTCATGGAGGAAAAGGAAGAAGCATTTCTTTGTTCTCAGTCATTCTGGCAAGCCAATATATTCTAGGTATGGAGATGAGCACAAGCTTGCAGGGTTTTCGGCAACTTTGCAAGCAATCATTTCTTTTGTGCAGACCGGGGGTGACTCTGTGAAATTGGTGAGGGCCGGAAAGCATCAGGTTGTTTTTCTTGTGAAAGGACCAATTTACTTAGTCTGCATCAGCTGTACAGAAGAACCTTATGAGTCATTAAGGGGGCAGTTGGAGTTAATCTATGGTCAGATGCTTGTTATACTAACAAAATCAGTAAACAGATGTTTTGAGAAGAATCCAAAGTTTGATATGACACCCTTGCTTGGTGGAACGGACATTGTCTTTTCCTCTCTAATCCACTCTTTCAGTTGGAATCCAGCTACATTTCTTCATGCCTATACTTGTCTTCCACTTGCATATGCAACAAGGCAAGCTGCAGGTGCTATCTTGCAAGACATTGCTGATTCGGGTGCTCTGTTTGCAATACTGATGTGCAGGCACAAGGTAATCAGTCTTGTTGGTGCCCAGAAAGCTGCCCTTCATCCAGATGATATGCTGCTGCTGGCCAACTTTGTTATGTCATCAGAATCCTTTAGGACGTCAGAATCATTTTCTCCAATTTGCCTTCCAAGATATAACCCTTCAGCATTTTTATATGCTTATATCCATTATTTTGATGCTGATACATACTTGATGCTGCTTACCACTAGTTCAGATGCATTTTATCATCTTAAAGATTGCAGGGTTCGTATCGAAATGGTCCTTTTGAAGTCAAACGTCCTCAGTGAAGCTCAGAGATCCTTGTTAGATGGGGGAATGCATGTTGAGGATCTTCCACCAATAGCTCGTTCTGGATCATCTCAGTTGGGCCACCGCAGGGTTCCATCAGATTCTCCTGAAAGATTCAGGGAACTTAATTCTGGGATCGGCGGTCCTGCAGGGTTGTGGCATTTTATATACCGTAGTATATATCTAGATCAATATGTCTCTTCAGAGTTGTCATCTCCCATTAATACTCCTCAGCAGCAAAAAAGACTGTATAGAGCTTACCAGAAACTTTTTGCATCCATGCATGATGAAGGAATTGGGCCACACAAAACTCAATTTAGAAGAGATGAAAACTATGTTCTTCTCTGTTGGGTGACACAGGATTTTGAGCTTTATGCTGCCTTTGATCCCCTTGCGGACAAGGCCTTGGCAATAAAGACGTGCAACCGTGTTTGTCAATGGGTAAGAGATGTGGAAAATGAAATATTTTTGCTAGGAGCTAGCCCCTTTTCCTGGTGA 1770 0.4638 MDSSSSSSASDTDSQTPPPLLPESLLHSGAESNASAGGSVTVELFVDEGEVGPGEVRVSIEPGSSEVTSSERTRIGSELEPEAPSSPSSGGYAGEIGSSSSSDTSGSQIVPIEREIEDMRIEVDDTLRGISDPETTWIPGKRHLDEDDASISWRKRKKHFFVLSHSGKPIYSRYGDEHKLAGFSATLQAIISFVQTGGDSVKLVRAGKHQVVFLVKGPIYLVCISCTEEPYESLRGQLELIYGQMLVILTKSVNRCFEKNPKFDMTPLLGGTDIVFSSLIHSFSWNPATFLHAYTCLPLAYATRQAAGAILQDIADSGALFAILMCRHKVISLVGAQKAALHPDDMLLLANFVMSSESFRTSESFSPICLPRYNPSAFLYAYIHYFDADTYLMLLTTSSDAFYHLKDCRVRIEMVLLKSNVLSEAQRSLLDGGMHVEDLPPIARSGSSQLGHRRVPSDSPERFRELNSGIGGPAGLWHFIYRSIYLDQYVSSELSSPINTPQQQKRLYRAYQKLFASMHDEGIGPHKTQFRRDENYVLLCWVTQDFELYAAFDPLADKALAIKTCNRVCQWVRDVENEIFLLGASPFSW* 590
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g3005 589 Pfam Third Longin domain of FUZ, MON1 and HPS1 475 575 IPR043970 GO:0016192
Aev04g3005 589 PRINTS Saccharomyces cerevisiae 73.5kDa hypothetical protein signature 261 273 IPR004353 GO:0006623
Aev04g3005 589 PRINTS Saccharomyces cerevisiae 73.5kDa hypothetical protein signature 363 386 IPR004353 GO:0006623
Aev04g3005 589 PRINTS Saccharomyces cerevisiae 73.5kDa hypothetical protein signature 391 417 IPR004353 GO:0006623
Aev04g3005 589 PRINTS Saccharomyces cerevisiae 73.5kDa hypothetical protein signature 554 567 IPR004353 GO:0006623
Aev04g3005 589 PRINTS Saccharomyces cerevisiae 73.5kDa hypothetical protein signature 210 224 IPR004353 GO:0006623
Aev04g3005 589 PRINTS Saccharomyces cerevisiae 73.5kDa hypothetical protein signature 538 552 IPR004353 GO:0006623
Aev04g3005 589 PRINTS Saccharomyces cerevisiae 73.5kDa hypothetical protein signature 567 587 IPR004353 GO:0006623
Aev04g3005 589 PRINTS Saccharomyces cerevisiae 73.5kDa hypothetical protein signature 290 311 IPR004353 GO:0006623
Aev04g3005 589 PRINTS Saccharomyces cerevisiae 73.5kDa hypothetical protein signature 158 175 IPR004353 GO:0006623
Aev04g3005 589 PRINTS Saccharomyces cerevisiae 73.5kDa hypothetical protein signature 176 196 IPR004353 GO:0006623
Aev04g3005 589 PRINTS Saccharomyces cerevisiae 73.5kDa hypothetical protein signature 314 327 IPR004353 GO:0006623
Aev04g3005 589 PRINTS Saccharomyces cerevisiae 73.5kDa hypothetical protein signature 338 354 IPR004353 GO:0006623
Aev04g3005 589 MobiDBLite consensus disorder prediction 1 21 - -
Aev04g3005 589 MobiDBLite consensus disorder prediction 91 108 - -
Aev04g3005 589 MobiDBLite consensus disorder prediction 1 108 - -
Aev04g3005 589 PANTHER BNAC04G15860D PROTEIN 2 589 - -
Aev04g3005 589 Pfam First Longin domain of FUZ, MON1 and HPS1 158 278 IPR043972 GO:0016192
Aev04g3005 589 Pfam Second Longin domain of FUZ, MON1 and HPS1 319 411 IPR043971 GO:0016192
Aev04g3005 589 PANTHER SAND PROTEIN-RELATED 2 589 IPR004353 GO:0006623
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g3005 Aev-Chr4 29868078 29872949 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g3005 K20195 - zju:107411372 859.751
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev04g3005 04 29868078 29872949 Aev04g3005 04 29868078 29872949 ECH
Aev10g1912 10 20569261 20575675 Aev04g3005 04 29868078 29872949 PCT