Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g3001 ATGTTCTGGAAGCTCGCATCTATCTCTGCCTCCTCTCCTGTGGAGACAATATTGGAAAAGGAGAACTTCACCCTCGAAGAGCTTCTTGATGAAGAAGAAATAATCCAAGAATGCAAGGCCTTAAACAGTCGTCTAATAAACTTTCTGAGAGATAGAGCCCAGGTTGAGCAATTGCTTCGCTATATTACTGAAGAACCTCCAGAAGATGCTGAAAACAAACGGGTTTTCAAGTTTCCATTCATTTCCTGTGAGATCTTTACATGTGAAATTGATGTGATTTTGAAGACCTTGGTGGATGAAGAAGAGCTCATGGACTTATTATTCTCCTTCTTGGAGCCTGATCGTCCTCATAGTGCCTTACTGGCTGGGTACTTTAGCAAGGTTGTTGTCTGCCTAATGATTAGGAAGACAGTGCCACTTATGAACTATGTTAAAGCCCATCAGCATGTATTTCGGCAACTGGTTGATTTGATAGGAATTACATCTATTATGGAGGTTTTGGTTCGATTAGTAGGCGCTGATGACCATGCATATCCCAATTTTATTGATGTGATGCAATGGTTGGCTGAGAGCAACCTCCTGGACATGATTGTTGATAAACTAAGTCCATCCAGTTCCCCAGAAGTTCATGCCAATGTAGCTGAAACATTATGTACAATTACTCGATATGCATCATCTACTCTAGCAATTAAACTTTCAAGTCCAAGTTTTGTGACAAAAATACTGGATTATGCATTGGAGGATTCACAATCAAAGTCTAGCCTTGTCTACTCACTTTCAGTGTGTATTTCTTTGTTGGATCCCAAAAGATCAGCTGTTTCATCTCCACTTTTTCATTCATTCCGAGGGCAAAACATGTATGAGCCTCCAATTCCTGTGAATCCAGATACAATTGGTGCAATGCTCCCTAAACTTGGTGCACTGCTTGTGCTTTTGAATGTGTCATCTGATGAAAAGGTATTGCCTACAACATATGGAGAACTGAGACCGCCACTTGGGAAACATCGGTTGAAGATTGTGGAGTTCATTGCTGTACTTTTAAAAGCTGGAAATGAAGTGGCGGAAAACGAATTGGTCAACTCAGGAACCATTCGACGCGTTGTTGATCTTTTCTTTGAGTATCCATACAATAACTCATTGCACCATCATGCAGAAAGTATCATATTATCATGTTTGGAGAGCAAAAGTGATGCCGTTGTTAATCATCTTCTTCGAGAGTGTGATTTGATTGGAAGGTTTCTACAAGCAGATAAACATTGTATTCTGTCTTCTGAAAGCAATCTGCCAACAGTACCTGCTTCAGGAAAACGAGTGCCAAGAGCAGGAAACATTGGACATATTACTAGAATTGTTAATAAACTTGTTCAGTTGGCACACAGCAGAAGTCACATACTGTCGTTTCTTCAGGAAAATAATGAGTGGAATGAGTGGCAAACTACAGTTCTTCAGGAGCGTAACATGGTTGAGAATGTTCACCGTTGGGCTTGCGGACGCCCTACAGCATTACAAGATAGGATGAGGGATAGCGATGACGATGACCGAGACTATGATGTTACAGCTTTAGCAAATAATTTGAGCCAGACATTAAGATACAATATGTACGGAAATGAGGATAATGAAGAGGAACGTGGCGGTGTTGATCGGGATGATGAGGATGTCTACTTTGATGATGATTCTGCTGAAGTAGTCATATCATCCCTAAGACTTGGTGATGATCAAGGGAGTAATCTGTTCACAAACTCCAACTGGTTTGCATTCCAAGATGACAGAATTAGTGATGCACCTGGTGCCACATCCTCCTCAGAGATGATGGATGAGATAAACTTGAATGGAGCTGCTAATGGTGGTAGCAACAGTAGTGACGATGAGGTAGTGGTCGGAGAAGATGAAGAATTGGCAGAAAACAAAAATACTGTGAGTGGCACATCTGGCTCAAGCACAGACTTTTTTGGTGGATTAACTAGCAACATTTCTATGAATGGAGGTGCTTTGGACTTTGAATCTGTGAAGGATAGACCTTCGCAAGATATGGGATTTTTCAGGTTTGATGCACCTGACAACGAGGACTTGTTTGGGGATAGGCCTTTACCTGATTGGGTTGCATGGGGAGAGTCGTCAGATGTGCAAGTTGCTGGCTCAAGCACCAATCCGTTCCTGGATCATGATGAGTCTGAGAGTTCTTTGTCTACTAAGGCTCAAGTAGGTAGCCCTAATCCGAGCACTCCTTCAAACGGGGAATCCGTACCCTCAAATGGGGAATCAGTGCCTTCAAATGGATCGCCTGCTACTAGCGATTCGACTGAGGGCAGTGGTGACTCGAGTCAGAAATCGGTTGCAGTACCCTCTCTATTTGAGGAGGATGTTGAATTCGTAGGCGTTGAATTAGAAGGTACTGAGAAGGCAATGGAACAGGCTCTGAAAGAAGGGATAGTTGGTGAAGCAGGACCTTTGAAAAGAAACGTATCCCCAAAAGTGGGTGAGAAGGAAAATTCTGAAGAGGGAAGCTCTGGAATGAAGGAGTTCAATGATGCAAATTACTGGAGGGTTGATCAAGAAGTTGCTGTTCTAGAGTGA 2574 0.4246 MFWKLASISASSPVETILEKENFTLEELLDEEEIIQECKALNSRLINFLRDRAQVEQLLRYITEEPPEDAENKRVFKFPFISCEIFTCEIDVILKTLVDEEELMDLLFSFLEPDRPHSALLAGYFSKVVVCLMIRKTVPLMNYVKAHQHVFRQLVDLIGITSIMEVLVRLVGADDHAYPNFIDVMQWLAESNLLDMIVDKLSPSSSPEVHANVAETLCTITRYASSTLAIKLSSPSFVTKILDYALEDSQSKSSLVYSLSVCISLLDPKRSAVSSPLFHSFRGQNMYEPPIPVNPDTIGAMLPKLGALLVLLNVSSDEKVLPTTYGELRPPLGKHRLKIVEFIAVLLKAGNEVAENELVNSGTIRRVVDLFFEYPYNNSLHHHAESIILSCLESKSDAVVNHLLRECDLIGRFLQADKHCILSSESNLPTVPASGKRVPRAGNIGHITRIVNKLVQLAHSRSHILSFLQENNEWNEWQTTVLQERNMVENVHRWACGRPTALQDRMRDSDDDDRDYDVTALANNLSQTLRYNMYGNEDNEEERGGVDRDDEDVYFDDDSAEVVISSLRLGDDQGSNLFTNSNWFAFQDDRISDAPGATSSSEMMDEINLNGAANGGSNSSDDEVVVGEDEELAENKNTVSGTSGSSTDFFGGLTSNISMNGGALDFESVKDRPSQDMGFFRFDAPDNEDLFGDRPLPDWVAWGESSDVQVAGSSTNPFLDHDESESSLSTKAQVGSPNPSTPSNGESVPSNGESVPSNGSPATSDSTEGSGDSSQKSVAVPSLFEEDVEFVGVELEGTEKAMEQALKEGIVGEAGPLKRNVSPKVGEKENSEEGSSGMKEFNDANYWRVDQEVAVLE* 858
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g3001 857 Pfam SIT4 phosphatase-associated protein 357 491 IPR007587 GO:0019903|GO:0043666
Aev04g3001 857 Pfam SIT4 phosphatase-associated protein 131 357 IPR007587 GO:0019903|GO:0043666
Aev04g3001 857 PANTHER SIT4 YEAST -ASSOCIATING PROTEIN-RELATED 1 855 IPR007587 GO:0019903|GO:0043666
Aev04g3001 857 MobiDBLite consensus disorder prediction 709 783 - -
Aev04g3001 857 MobiDBLite consensus disorder prediction 816 843 - -
Aev04g3001 857 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE 6 REGULATORY SUBUNIT 2-LIKE ISOFORM X1 1 855 - -
Aev04g3001 857 MobiDBLite consensus disorder prediction 822 836 - -
Aev04g3001 857 MobiDBLite consensus disorder prediction 709 780 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g3001 Aev-Chr4 29811817 29820973 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g3001 K15501 - gmx:100805409 1344.72
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev04g3001 04 29811817 29820973 Aev04g3001 04 29811817 29820973 ECH
Aev10g1915 10 20601870 20608826 Aev04g3001 04 29811817 29820973 PCT