Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g2996 ATGTTGGAGCAAGAACAAGAACAAATTCAAATGGAAAGAGAAGAAGGTGAAGTGAAACAAGAACAAGAATCAAATTCAAATTCAAGGTTCAAGAGGGTGTGTGTTTTCTGTGGTAGCAGCCCAGGGAACAAGAGCAGTTATAAGGAAGCTGCAATTGAGCTTGGAAAGGAATTGGTGTCAAGAAACATTGATCTGGTTTATGGAGGAGGCAGCATTGGTTTGATGGGTTTGGTTTCTCAAGCTGTTTATGATGGAGGCCGCCATGTAATTGGAGTTATTCCCAAGACACTAATGCCAAAAGAGATAACAGGAGAGACAGTGGGGGAAGTGAAAGAAGTAGCAGACATGCATCAAAGAAAAGCAGAGATGGCTAAGCATTCTGATGCTTTCATTGCCTTACCCGGTGGCTATGGAACACTTGAGGAGCTTCTTGAGGTCATAACTTGGGCTCAGCTTGGCATCCATGATAAACCGGTGGGGTTGTTGAATGTAGATGGATACTACAATTCATTGTTGTCCTTCATTGACAAAGCTGTGGAAGAAGGCTTCATTAGCCCAAAAGCTCGCCACATAATTGTATCTGCCCCTTCAACAAAAGAACTTGTCAAAAAGATGGAGGAATATTTCCCACAACATGAAAGAGTTGCCTCTAAGCTAAGCTGGGAATCAGAGCAGCTAGGATACTCCTCAAATTGTGACATCTCAAGGAGTGACATTGAATCTAATTCGATTTGTGAGATGGGTTTTGGACGGAATTCGTCCGCAAGAAGCAGTGGAGATTACTTGGAAGGGATGATCAATGAATATGTTGGAACAAAATCAAAATCAAAACCACCAAGAAGTGCTTCAACAAAGTTTGTAACAGCACTAACATGCCTCCAATTCTTCTTTGCAGTATATGCAACATTTCTATTGTACTACATGGGTCCTTCAATAGACCTAAGAACAAAACCAGATTTCACATGGGCCACAAGAATTGCTCAACAATGGAAGCAAATCATGATCACAACACCCCATGTTGTAGGACACTACCAAGAAGCCTCTTCTTCTCTCATAAGTGAAGAGATTCAACCCATAAACCAATCACTAGTCTGTGAGAATGAGAAGATTGATTTCATGCAGAAAAAATCCAATGATGTTCAGATGATAAAGTTGAAGAATGAGCTTTACAAAGAAGTCTTGGATTTCCAAAGCAGAACAATTGGAACAGAGACACTAACTCAGCTTATGGCAATGAAATCCAAATGGGACATGAAAAATCCACAAAAGCCAAAGATCACAGTTTTGTTGAACCATTTCAAGAGAAAAACACTTTGTGCTCAGCTTGATTCTCTGCTGCAACAAACCCTCCCATTCCATCATGTTTGGGTGCTTTCATTTGGCAGCCCAAATGAACTCTCACTGAGGCGAATCGTCGAAAGCTATAATGATTCAAGAATCAGCTTCATAAGCTCAAGTTATGATTTCAAGTACTATGGGAGGTTCCAAATGGCGCTTCAGACAGAGAGTGATCTGGTTTACATAGTTGACGACGACATGATACCTGGGAGGAAGATGCTGCAGATTCTGGCACATGTTGCTGGGACAGAAAAGTATAAGAACTCTGTTTTGGGGAGTATTGGGAGGATTTTGCCATTTAGGCAGAAGGATTTCACTTTCCCAAGTTACAGGAAGTTTAGGTCTAAAGAGGCAGGGTTGTATTTGCCTGATCCTGCTTATGATATCACTGTTGATAAGATTGTGCAGGTTGATTTTCTTTCTAGCTCTTGGTTTTTGTCTTCTCACCTTGTCAAGACACTCTTCACTGAGACACCTTTTACCTTCTCAACTGGTGAAGATCTGCATCTAAGCTATCAGCTACAGAAGTACAAAAATGCAGGGTCATTTGTTCTTCCAGTTGACCCTAATGACAAGGAAACATGGGGTGATAGTGAACACAGGCTAGCATATGTATCAGAAACCACAGTGATTTTTAAGGACATAGTTCAAGTAAGAGATGACCAATGGTGGAAAGCCCTTTCCACAGGCTATGTAACACAATGGGCAGCCATGTACCCTCAAAAAATTGATGCACTTTTCTATGCTCACTCAATTGATCAAGTTAAGTCACTTGCGCCACTCCTTGAGAAATTCAGATCAACTGTTGGCAAAAAGGCCTATTTGGTCGTCTCGGGCGGCGGTTTCTGTCCCTGCGAAGCCGCCGCTACGGCGCTGAATTGGCCTTTGTTGGTGTGCAAGGAGAGGAGGTTTAAGATATTTGATTTGGCAATTGGAGCAATTTCTGGTTTGTCTAATTCTGAGGTGCCAGTTATACAAGCAGTGTATTCTAGCATGAAGGGTTTGATCAAGATTCATAATCCTAGTGTTGTGATCACTGTGGCTGATATTGATACTAATGTGAAGAAGGCTCTTAAGATGGCATCAGAGACTAATTCAAATGGTACTACATTGGTTCTTTTGCCAAGAGCTTCTGTTTCTAAGGTTCTTTGGATGGCTGATTTGCGTTCAACTGCATTGCCAAATTGGAATAGGATGAGGATTTCCATCAACATCATAACACAAAACAGAGCAAATTCACTAGCAAGGCTACTCAATTCTCTAAGCAATGCTTACTATCTTGGTGATGAAGTCTCCATAACCTTCAACATGGATAGTAAAGTAGATGAGGGAACAATAAGACTAGTGGGCTCATTTGAGTGGCCACATGGGCCCAAAACCCTAAGAAGAAGAATCATCCAAGGTGGGCTTATCCGGGCTGTGAGTGAGAGTTGGTACCCTTCATCAGATGATGACTTTGGGCTTTTACTTGAAGATGACATTGAAGTCTCACCTTACTATTACCTTTGGATCAAATATGCACTAATGGCTTATCATTATGACCCTCAAGTTTCACTTCCTGAACTCTCATCAATCTCACTCTACACTCCAAGGCTTGTTGAGGTTGTCAAAGAAAGGCCCAAATGGAATGCAACTGAATTCTTCAAAAAGATTCATCCAAACACACCCTATCTCCACCAATTACCATGTAGTTGGGGTGCAGTGTTTTTCCCTAAGCATTGGAGAGAATTCTATGTTTATATGAACATGAGGTTCACTGAGGATGCCAAATTAAACCCAGTTCAAATCCCTAAGTCTAGAACAAATGGGTGGCAAGCATCATGGAAGAAATTCTTAATTGATATGATGTACCTCAGAGGGTACATTAGTCTTTACCCGAATTTTCCTAACCAATCCAGCTTCTCGACAAACCATATGGAACCAGGTGCACACATTAGTGCTAAGGATAATATTGTAAAACATAATATACAAGATTTCGAGGTTCCACTTATGAAGGATGATTTCAGGAACTTTTTACCAGGATTGAAAATGCCACCAGCATCAAAGTTACCATCATTAAACCTTTTCAATCAACCAGTTTCTCTAAAGGGTCTAAAAGCTGCAGGGGCAAAATTGGGACAGGATGTGTTAAGGTGTGACAATGCAACTGAGGTTGTAGCTGTGGATCATGATACGGGTCTACCACATCATTGCTCCAAATTCTGA 3543 0.4118 MLEQEQEQIQMEREEGEVKQEQESNSNSRFKRVCVFCGSSPGNKSSYKEAAIELGKELVSRNIDLVYGGGSIGLMGLVSQAVYDGGRHVIGVIPKTLMPKEITGETVGEVKEVADMHQRKAEMAKHSDAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNVDGYYNSLLSFIDKAVEEGFISPKARHIIVSAPSTKELVKKMEEYFPQHERVASKLSWESEQLGYSSNCDISRSDIESNSICEMGFGRNSSARSSGDYLEGMINEYVGTKSKSKPPRSASTKFVTALTCLQFFFAVYATFLLYYMGPSIDLRTKPDFTWATRIAQQWKQIMITTPHVVGHYQEASSSLISEEIQPINQSLVCENEKIDFMQKKSNDVQMIKLKNELYKEVLDFQSRTIGTETLTQLMAMKSKWDMKNPQKPKITVLLNHFKRKTLCAQLDSLLQQTLPFHHVWVLSFGSPNELSLRRIVESYNDSRISFISSSYDFKYYGRFQMALQTESDLVYIVDDDMIPGRKMLQILAHVAGTEKYKNSVLGSIGRILPFRQKDFTFPSYRKFRSKEAGLYLPDPAYDITVDKIVQVDFLSSSWFLSSHLVKTLFTETPFTFSTGEDLHLSYQLQKYKNAGSFVLPVDPNDKETWGDSEHRLAYVSETTVIFKDIVQVRDDQWWKALSTGYVTQWAAMYPQKIDALFYAHSIDQVKSLAPLLEKFRSTVGKKAYLVVSGGGFCPCEAAATALNWPLLVCKERRFKIFDLAIGAISGLSNSEVPVIQAVYSSMKGLIKIHNPSVVITVADIDTNVKKALKMASETNSNGTTLVLLPRASVSKVLWMADLRSTALPNWNRMRISINIITQNRANSLARLLNSLSNAYYLGDEVSITFNMDSKVDEGTIRLVGSFEWPHGPKTLRRRIIQGGLIRAVSESWYPSSDDDFGLLLEDDIEVSPYYYLWIKYALMAYHYDPQVSLPELSSISLYTPRLVEVVKERPKWNATEFFKKIHPNTPYLHQLPCSWGAVFFPKHWREFYVYMNMRFTEDAKLNPVQIPKSRTNGWQASWKKFLIDMMYLRGYISLYPNFPNQSSFSTNHMEPGAHISAKDNIVKHNIQDFEVPLMKDDFRNFLPGLKMPPASKLPSLNLFNQPVSLKGLKAAGAKLGQDVLRCDNATEVVAVDHDTGLPHHCSKF* 1181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g2996 1180 Pfam Possible lysine decarboxylase 75 205 IPR031100 -
Aev04g2996 1180 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 406 633 IPR029044 -
Aev04g2996 1180 PANTHER - 274 1180 - -
Aev04g2996 1180 CDD Glyco_tranf_GTA_type 436 527 - -
Aev04g2996 1180 SUPERFAMILY MCP/YpsA-like 30 208 - -
Aev04g2996 1180 SUPERFAMILY Nucleotide-diphospho-sugar transferases 423 624 IPR029044 -
Aev04g2996 1180 MobiDBLite consensus disorder prediction 1 24 - -
Aev04g2996 1180 Coils Coil 2 24 - -
Aev04g2996 1180 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 846 1095 IPR029044 -
Aev04g2996 1180 Gene3D - 19 207 - -
Aev04g2996 1180 PANTHER OSJNBA0004B13.7 PROTEIN 274 1180 - -
Aev04g2996 1180 SUPERFAMILY Nucleotide-diphospho-sugar transferases 844 1058 IPR029044 -
Aev04g2996 1180 TIGRFAM TIGR00730: TIGR00730 family protein 31 208 IPR005269 GO:0009691|GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g2996 Aev-Chr4 29730564 29749764 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g2996 - - gsj:114374559 1680.23
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev04g2996 04 29730564 29749764 Aev04g2996 04 29730564 29749764 ECH