Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g2988 ATGCACACTATGGCTTACAAAAATCTCATTCAATTCACTTCATTATTTTCTTTGGTTCTTCTTTTATTGTGTATTTGTGAGTCCAATGCTCGCATTCTTGAGGATGATAATGCCTCAATGTATGAGAGGCATGAGCAATGGATGGCTCAACATGGAAAAACCTACAAGGACTTATATGAGAAGGAATTGAGGTACCAAATATTCAAACAAAATGTGCAAAAAATTGAAGCTTTTAATAGTGTTGGGAACAAGCCTTACAAGCTTGGAATCAACCAATTTGCTGATATGACAAATGAGGAATTCAAGAATATGAATAGATTCAAGGGTCACATGTCCTTCACAAAAACAAAAACACCCACATTTAAGTATGAAAATGTGACTGCAGTTCCTGATTCAGTGGATTGGAGACAGAACGGTGCTGTCACACCAGTTAAGGACCAAGGCCAATGTGGATGTTGTTGGGCATTTTCTGCTGTGGCTGCAACAGAAGGAATCACTAAGCTGACCACTGGCAAACTGATCTCGCTATCAGAACAAGAACTCGTTGATTGTGACACAAAAGGTGAGGACCAAGGTTGTGAAGGTGGTCTTATGGATGATGCATTCAAATTCATCATCCAAAACAAAGGACTCACCACAGAATCCAATTACCCCTACAAGGGTGTTGATGGAACATGCAATTCCAAAGCAGAGTCCAACCATGCTGCAACCATAACAGGGTACGAGGATGTCCCAGCCAACAGTGAAAGTGCTCTGCTCAAAGCTGTTGCAAACCAACCCGTCTCTGTTGCAATTGATGCTAGTGGATCTGAGTTCCAGTTTTACTCTGGTGGTGTTTTCACAGGACCATGTGACACTAATTTGGATCATGGTGTTACTGCTGTTGGTTATGGTGTTAGTGATGATGGAACTAAGTATTGGCTGGTTAAGAATTCTTGGGGACAACAATGGGGTGAAAATGGATACATTAGGATGCAGAGGGATATTGATGCTAATGAGGTCGCTTTCCTTTCGCCTCTTCAGTTACAGGCGGAGACAGCGGTTGCGGCGAGGGTTCCAGCGAGGAGCTTGCCATTTGATTTGCGCCGCGACGGAGGAAGCTGCTGCGGAGGTGTTGGTGGCGGTGGTGTTTGGAATTTTACTTGTTACTTTATCGTGGCTTCTTCCGAGATGGTGAAGGCCAAGGTTCGAGATTTAGTTATCCCATCCCACCTAGATCCATCCCTCCTTCGAGTTTTTGATGAAGTGACTGGTGTTGAAACCGACGTCACTTCGGAGTATCTGGAAAAGTTTTTAGATCATCATCAAATTTTCTCTTCTGATGAAATGAGCAACGCTCATGTGCTAGAAGTTCCCCATTCCGACCGCCGTGTCTGGTACCGACGTCACCGCTGTGTACTCAAGAACGACTTCCCGACCCTAGAGTTCATTGACACGACCTTGTGCCATAAGGAAGTTCGTAACCTTTTGAGCAAGGGTTCTGCTATCCCGTCCTTGCAGACGGTCGAGCGGTTCCTTTTGCAATCTGCTACCACCCTCAGGTTCTGGGAATCGGTGGTATCTGATGCTGAAGTTCTCAAGCGCCGAGTTGCCCAGTACGCGACCAAGATTGAGGAGCTTCAAGCTCGTGTTCGCTCGCTGGAGGAGGTCGTGGAGAAGGACAAGCTCCTTGCTGCCACCCAAGAGGAGAAACTGCGAACTCAAGGAGCCGATCTGGAGACTCTCCGATCTGAGCTGAAGAAGTTGGAAACTGATGAAGTTCAGATTCTCCAGAACGAGCATGGGAAGATGGTGGAATGCCTTGAGGCGAAGGAGACGGAGAGGAAAATGTTGAAAGCTTGGAAGAGCAGTGATGAAGTTATGAAAAACACTCGACCAAGTCCGTCTTCTATCTCCCGACCTTGGCTTGTCCTCTGTTAG 1920 0.4594 MHTMAYKNLIQFTSLFSLVLLLLCICESNARILEDDNASMYERHEQWMAQHGKTYKDLYEKELRYQIFKQNVQKIEAFNSVGNKPYKLGINQFADMTNEEFKNMNRFKGHMSFTKTKTPTFKYENVTAVPDSVDWRQNGAVTPVKDQGQCGCCWAFSAVAATEGITKLTTGKLISLSEQELVDCDTKGEDQGCEGGLMDDAFKFIIQNKGLTTESNYPYKGVDGTCNSKAESNHAATITGYEDVPANSESALLKAVANQPVSVAIDASGSEFQFYSGGVFTGPCDTNLDHGVTAVGYGVSDDGTKYWLVKNSWGQQWGENGYIRMQRDIDANEVAFLSPLQLQAETAVAARVPARSLPFDLRRDGGSCCGGVGGGGVWNFTCYFIVASSEMVKAKVRDLVIPSHLDPSLLRVFDEVTGVETDVTSEYLEKFLDHHQIFSSDEMSNAHVLEVPHSDRRVWYRRHRCVLKNDFPTLEFIDTTLCHKEVRNLLSKGSAIPSLQTVERFLLQSATTLRFWESVVSDAEVLKRRVAQYATKIEELQARVRSLEEVVEKDKLLAATQEEKLRTQGADLETLRSELKKLETDEVQILQNEHGKMVECLEAKETERKMLKAWKSSDEVMKNTRPSPSSISRPWLVLC* 640
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g2988 639 ProSitePatterns Eukaryotic thiol (cysteine) proteases asparagine active site. 306 325 IPR025661 -
Aev04g2988 639 ProSitePatterns Eukaryotic thiol (cysteine) proteases histidine active site. 288 298 IPR025660 -
Aev04g2988 639 Pfam Cathepsin propeptide inhibitor domain (I29) 44 101 IPR013201 -
Aev04g2988 639 SUPERFAMILY Cysteine proteinases 38 332 IPR038765 -
Aev04g2988 639 PANTHER CYSTEINE PROTEASE FAMILY C1-RELATED 26 332 - -
Aev04g2988 639 Coils Coil 523 557 - -
Aev04g2988 639 ProSitePatterns Eukaryotic thiol (cysteine) proteases cysteine active site. 147 158 IPR000169 -
Aev04g2988 639 Pfam Papain family cysteine protease 129 330 IPR000668 GO:0006508|GO:0008234
Aev04g2988 639 SMART Inhibitor_I29_2 44 101 IPR013201 -
Aev04g2988 639 SMART pept_c1 129 340 IPR000668 GO:0006508|GO:0008234
Aev04g2988 639 Gene3D Cysteine proteinases 24 337 - -
Aev04g2988 639 Coils Coil 565 592 - -
Aev04g2988 639 PRINTS Papain cysteine protease (C1) family signature 147 162 IPR000668 GO:0006508|GO:0008234
Aev04g2988 639 PRINTS Papain cysteine protease (C1) family signature 306 312 IPR000668 GO:0006508|GO:0008234
Aev04g2988 639 PRINTS Papain cysteine protease (C1) family signature 290 300 IPR000668 GO:0006508|GO:0008234
Aev04g2988 639 CDD Peptidase_C1A 130 328 IPR039417 -
Aev04g2988 639 PANTHER - 26 332 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g2988 Aev-Chr4 29645076 29649927 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g2988 - K16292 gmx:100778111 527.324