Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g2969 ATGGCCTCCGCCAACGCCCTCTCCTCCGCCTCCATCCTCCGCTCCGCCAACCGCCACCAGAGTTTGAGCAACAGGAGGCTCAACAACAACCAGAATGGCAGAGTGAATTACCGGCAACCGGCTAAACCTCGCTTCTCCGTTAAAGCGTCAGCTAAGGAGATTGCGTTCGACCAGAACTCACGCGCTGCTATGCAAGCCGGCATCGACAAGCTTGCCGATGCCGTCGGTCTCACCCTTGGCCCTAGGGGGAGGAATGTTGTGTTGGATGAGTTTGGAAACCCTAGAGTTGTTAATGATGGTGTCACCATTGCCCGTGCAATTGAGTTGCCCGATGCCATGGAGAATGCCGGTGCTGCTCTCATTAGGGAGGTAGCGAGTAAGACCAATGACTCTGCAGGTGATGGGACAACCACAGCATCTGTTCTTGCTAGGGAGATAATTAAGCTTGGACTGCTCAGTGTGACCTCTGGTGCTAACCCTGTGTCCCTCAAGAGAGGAATTGATAAAACTGTTCAGGGTTTGGTTGAGGAGCTCGAAAAGAGGGCCAGGGCTGTCAAAGGAGGAGATGACATCAAAGCCGTTGCTTCTATTTCTGCTGGAAATGACGAGTTGATTGGGGAAATGATCGCCGAAGCAATTGACAAGGTTGGGCCTGATGGTGTTTTGTCCATTGAGTCATCATCCTCATTTGAGACTACTGTCGAAGTTGAAGAGGGAATGGAGATTGACAGAGGCTACATCTCCCCTCAATTTGTTACAAACCCTGAGAAGTCAATTGTTGAATTCGAGAATGCAAGAGTCTTGATTACTGATCAGAAGATCACAGCAATTAAGGATATAATTCCTCTGTTGGAGAAGACCACTCAATTGAGAGCCCCCTTGCTTATCATTGCTGAAGATATAACTGGTGAGGCTTTGGCTACCCTTGTTGTGAACAAACTGCGAGGTATCCTTAATGTTGCTGCCATCAAAGCTCCTAGCTTCGGTGAGAGGCGAAAGGCCCACCTTCAGGACATTGCTATATTGACAGGGGCTGAGTTCCAAGCCAGTGACCTCGGACTACTTATCGAGAATACCACAGTGGAGCAGCTTGGTTTGGCTCGCAAAGTGACCATCTCCAAGGACTCTACCACTATTATTGCTGACGCTGCGTCGAAGGATGAGTTGCAAGCCAGGGTCGCACAGTTAAAGAAGGAGTTGGCAGAGACAGACTCAGTTTATGATTCAGAGAAACTGGCAGAGAGGATTGCTAAATTGTCTGGTGGAGTTGCAGTGATCAAGGTTGGTGCTGCCACAGAGACTGAACTTGAGGACCGTAAGCTCAGAATTGAGGATGCCAAGAATGCAACTTTTGCTGCCATCGAGGAAGGTATTGTTCCTGGTGGAGGTACTGCATTGGTTCATCTCTCTGCTCTTGTCCCAGCAATCAAGGACAAGCTTGAAGATGCAGATGAGAGGCTAGGAGCCGATATTGTGCAAAAGGCATTGGTAGCGCCTGCATCATTGATCGCTCAGAATGCCGGTATAGAAGGCGAAGTAGTTGTGGAGAAGATAAAGAACGGTGAATGGGAGGTTGGTTACAATGCCATGACAGACAAGTATGAGAATTTGGTTGAGTCTGGAGTCATTGACCCTGCCAAGGTAACAAGGTGCGCTTTGCAGAATGCTGCTTCAGTTGCCGGAATGGTCTTGACCACACAGGCCATCGTGGTGGAGAAGCCTAAACCCAAGGCACCAGCAGTCGCCGCCCCACAAGGCCTTACCGTATGA 1770 0.4977 MASANALSSASILRSANRHQSLSNRRLNNNQNGRVNYRQPAKPRFSVKASAKEIAFDQNSRAAMQAGIDKLADAVGLTLGPRGRNVVLDEFGNPRVVNDGVTIARAIELPDAMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVQGLVEELEKRARAVKGGDDIKAVASISAGNDELIGEMIAEAIDKVGPDGVLSIESSSSFETTVEVEEGMEIDRGYISPQFVTNPEKSIVEFENARVLITDQKITAIKDIIPLLEKTTQLRAPLLIIAEDITGEALATLVVNKLRGILNVAAIKAPSFGERRKAHLQDIAILTGAEFQASDLGLLIENTTVEQLGLARKVTISKDSTTIIADAASKDELQARVAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGTALVHLSALVPAIKDKLEDADERLGADIVQKALVAPASLIAQNAGIEGEVVVEKIKNGEWEVGYNAMTDKYENLVESGVIDPAKVTRCALQNAASVAGMVLTTQAIVVEKPKPKAPAVAAPQGLTV* 590
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g2969 589 PRINTS 60kDa chaperonin signature 315 338 IPR001844 GO:0042026|GO:0140662
Aev04g2969 589 PRINTS 60kDa chaperonin signature 397 422 IPR001844 GO:0042026|GO:0140662
Aev04g2969 589 PRINTS 60kDa chaperonin signature 130 157 IPR001844 GO:0042026|GO:0140662
Aev04g2969 589 PRINTS 60kDa chaperonin signature 75 101 IPR001844 GO:0042026|GO:0140662
Aev04g2969 589 PRINTS 60kDa chaperonin signature 445 466 IPR001844 GO:0042026|GO:0140662
Aev04g2969 589 Gene3D GroEL 239 420 IPR027409 -
Aev04g2969 589 SUPERFAMILY GroEL equatorial domain-like 55 570 IPR027413 -
Aev04g2969 589 TIGRFAM GroEL: chaperonin GroL 51 575 IPR001844 GO:0042026|GO:0140662
Aev04g2969 589 MobiDBLite consensus disorder prediction 15 46 - -
Aev04g2969 589 Hamap Chaperonin GroEL [groEL]. 50 587 IPR001844 GO:0042026|GO:0140662
Aev04g2969 589 Coils Coil 386 406 - -
Aev04g2969 589 CDD GroEL 52 572 IPR001844 GO:0042026|GO:0140662
Aev04g2969 589 SUPERFAMILY GroEL apical domain-like 231 423 IPR027409 -
Aev04g2969 589 PANTHER BNAA04G16190D PROTEIN 1 588 - -
Aev04g2969 589 ProSitePatterns Chaperonins cpn60 signature. 452 463 IPR018370 GO:0005524|GO:0006457
Aev04g2969 589 Pfam TCP-1/cpn60 chaperonin family 71 574 IPR002423 GO:0005524
Aev04g2969 589 Gene3D - 54 571 IPR027413 -
Aev04g2969 589 PANTHER 60 KDA HEAT SHOCK PROTEIN, MITOCHONDRIAL 1 588 - -
Aev04g2969 589 SUPERFAMILY GroEL-intermediate domain like 185 249 IPR027410 -
Aev04g2969 589 Gene3D - 184 457 IPR027410 -
Aev04g2969 589 MobiDBLite consensus disorder prediction 15 37 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g2969 Aev-Chr4 29484712 29487934 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g2969 - - gmx:100806471 981.859
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev04g2969 04 29484712 29487934 Aev04g2969 04 29484712 29487934 ECH