Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g2956 ATGGGCGAGAAGAAGAACGATGGAGAAAACAAGGATAACAACAATAACAGCAACAATGTTGTGTTGAAGGTTGACATGCACTGTGAAGGTTGCGCTTCCAAAATCATCAAATACCTTCGTGCTTTTCCAGGGGTGGAGACGGTGAAAGCAGAGAGTGAAACGGGGAAGATAACAATCACCGGAAAAGTGGACCCCATAAAAGTGAAGGAGAAGCTCAGCGAGAAGATGAAGAAGAAGGTGGAGCTGGTTTCTCCTCAGCCCAAGAAGGAGAACAAAGAGAACAAAGAAAACAACAGCAACAACAACAAAACCGACGACAGCAAAAAACCCAAAGAGAGAGAGCCTCCGGTGACGACGGCGGTTCTCAAGGTGGCACTTCACTGCCAGGGATGTCTGGACAGAATTGGCAAGACTGTCTTGAAAACCAAAGGGGTTCATGAATTATCAATAGACAAGGAGAAGGAGACTGTGACTGTGAAGGGGACAATGGATGTTAAAGCATTGGCAGGGAATTTGATGGAGAAGCTGAAGAGGAAGGTTGAGGTTGTCCCCCCTAAGAAGGACAACAAGGACAAGGAAAATAATGGTGGTGGTGGTGAAAAAGAAGGATCAGGGAAGAATAAGAACAAGGGTGGTGGTGGTGGAGGGGATGGTAATGGGGATGGAGGAGCTGGAGGGAAGATAATGGAGCAGAACATAATGATGATGGATCATTTGGCTGTGGCACCTCCTCTTCCATTTGGCTTTGGATATGGTGTTCCTCATCCTCATCAATACAATGGTGGCGCCAATGTTGTTGGCGGCTATGGCTATTCCTATGTGCCACAAGGATTTTGA 837 0.4671 MGEKKNDGENKDNNNNSNNVVLKVDMHCEGCASKIIKYLRAFPGVETVKAESETGKITITGKVDPIKVKEKLSEKMKKKVELVSPQPKKENKENKENNSNNNKTDDSKKPKEREPPVTTAVLKVALHCQGCLDRIGKTVLKTKGVHELSIDKEKETVTVKGTMDVKALAGNLMEKLKRKVEVVPPKKDNKDKENNGGGGEKEGSGKNKNKGGGGGGDGNGDGGAGGKIMEQNIMMMDHLAVAPPLPFGFGYGVPHPHQYNGGANVVGGYGYSYVPQGF* 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g2956 278 CDD HMA 21 81 IPR006121 GO:0046872
Aev04g2956 278 CDD HMA 121 161 IPR006121 GO:0046872
Aev04g2956 278 SUPERFAMILY HMA, heavy metal-associated domain 116 180 IPR036163 GO:0046872
Aev04g2956 278 MobiDBLite consensus disorder prediction 74 116 - -
Aev04g2956 278 Gene3D - 13 91 - -
Aev04g2956 278 MobiDBLite consensus disorder prediction 178 225 - -
Aev04g2956 278 Gene3D - 117 189 - -
Aev04g2956 278 PANTHER HEAVY METAL-ASSOCIATED ISOPRENYLATED PLANT PROTEIN 3 4 260 - -
Aev04g2956 278 Pfam Heavy-metal-associated domain 122 181 IPR006121 GO:0046872
Aev04g2956 278 Pfam Heavy-metal-associated domain 22 79 IPR006121 GO:0046872
Aev04g2956 278 SUPERFAMILY HMA, heavy metal-associated domain 20 82 IPR036163 GO:0046872
Aev04g2956 278 MobiDBLite consensus disorder prediction 178 207 - -
Aev04g2956 278 PANTHER HEAVY METAL-ASSOCIATED ISOPRENYLATED PLANT PROTEIN 6 4 260 IPR044594 GO:0046872
Aev04g2956 278 ProSiteProfiles Heavy-metal-associated domain profile. 26 74 IPR006121 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g2956 Aev-Chr4 29341722 29343637 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g2956 - - gmx:100797817 240.736
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev04g2956 04 29341722 29343637 Aev04g2956 04 29341722 29343637 ECH