Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g2934 ATGCAAGCATCAATGGTGGCGCCCCAAGCTCTTCTCTCTCCCTTCCCAAACCCACTCCTCAGATCCTCCTTCTCCGGCGTCTCCATCAATCCCATTAACCTCTCCTCCCATCCCTTGACCCTCTCACTCTCAGCCTCCAAGCGCCTCACTATCGTCGCCGCCACCAAGAAAGCCGTCGCCGTCCTCAAGGGCACCTCCGCCGTCGAGGGCGTCGTCACTCTCACCCAGGATGACGAAGGCCCTACTACAGTTAATGTTCGAGTAACTGGCCTTACTCCGGGCCTTCATGGTTTTCACCTTCATGAGTATGGTGATACCACAAACGGGTGTATATCAACTGGACCACATTTTAATCCTAATAACATGACACACGGTGCTCCTGAAGATGAAGTCCGTCATGCGGGTGACCTGGGAAACATAGTTGCCAATGCCGATGGCGTTGCAGAGGCAACAATTGTTGATAGTCAGATACCACTCAGTGGCCCCAATTCAGTTGTTGGAAGAGCCCTTGTGGTTCACGAACTTGAGGATGACCTTGGAAAGGGTGGGCATGAACTTAGTTTGAGCACTGGAAATGCTGGTGGAAGATTAGCATGTGGTGTGGTTGGTTTGACTCCACTGTAA 624 0.5224 MQASMVAPQALLSPFPNPLLRSSFSGVSINPINLSSHPLTLSLSASKRLTIVAATKKAVAVLKGTSAVEGVVTLTQDDEGPTTVNVRVTGLTPGLHGFHLHEYGDTTNGCISTGPHFNPNNMTHGAPEDEVRHAGDLGNIVANADGVAEATIVDSQIPLSGPNSVVGRALVVHELEDDLGKGGHELSLSTGNAGGRLACGVVGLTPL* 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g2934 207 Gene3D Superoxide dismutase, copper/zinc binding domain 52 206 IPR036423 GO:0006801|GO:0046872
Aev04g2934 207 CDD Cu-Zn_Superoxide_Dismutase 56 199 IPR001424 GO:0006801|GO:0046872
Aev04g2934 207 ProSitePatterns Copper/Zinc superoxide dismutase signature 1. 97 107 IPR018152 -
Aev04g2934 207 PANTHER SUPEROXIDE DISMUTASE [CU-ZN] 1 54 205 - -
Aev04g2934 207 PANTHER SUPEROXIDE DISMUTASE CU-ZN -RELATED 54 205 IPR024134 -
Aev04g2934 207 Pfam Copper/zinc superoxide dismutase (SODC) 68 202 IPR001424 GO:0006801|GO:0046872
Aev04g2934 207 ProSitePatterns Copper/Zinc superoxide dismutase signature 2. 191 202 IPR018152 -
Aev04g2934 207 PRINTS Cu-Zn-superoxide dismutase family signature 133 142 IPR001424 GO:0006801|GO:0046872
Aev04g2934 207 PRINTS Cu-Zn-superoxide dismutase family signature 152 174 IPR001424 GO:0006801|GO:0046872
Aev04g2934 207 PRINTS Cu-Zn-superoxide dismutase family signature 177 203 IPR001424 GO:0006801|GO:0046872
Aev04g2934 207 PRINTS Cu-Zn-superoxide dismutase family signature 97 119 IPR001424 GO:0006801|GO:0046872
Aev04g2934 207 SUPERFAMILY Cu,Zn superoxide dismutase-like 57 204 IPR036423 GO:0006801|GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g2934 Aev-Chr4 29110053 29114551 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g2934 K04565 - gmx:100815376 323.553
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev04g2934 04 29110053 29114551 Aev04g2934 04 29110053 29114551 ECH