Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g2909 ATGGCTTCTTCTTCTGTGCGTGTGGATCTCGATGGGAACCCCATTACGCCATTGACGATCTGCATGATCGGTGCTGGTGGCTTCATTGGTTCACACCTCTGCGAGAAGCTCATGTCCGAAACCCAACACAAGGTCCTTGCTTTGGATGTTTACAATGACAAGATCAAGCATCTTTTGGAGCCAGAATCTACGCTTCCATGGGCTGGCAGAATCCAATTCCACCGCCTCAACATCAAGCACGATCCAAGGCTCGAGGGTCTCATCAAGATGGCAGATCTGACCATTAATCTGGCTGCAATTTGCACCCCTGCGGATTACAATACCCGTCCCCTTGACACCATTTACAGCAACTTCATCGATGCTCTCCCTGTGGTGAAGTATTGTTCTGAAAATAACAAGCGCCTCATTCACTTCTCTACTTGTGAAGTTTATGGGAAAACCATTGGAAGCTTTCTCCCAAAAGATAGTCCTCTTCGTCAGGATCCTGCATACTATGTTCTTAAAGAAGATGAGTCTCCATGCATTTTTGGTTCGATTGAAAAGCAGAGATGGTCCTATGCTTGTGCAAAGCAGTTGATTGAGAGGCTGATTTATGCTGAGGGTGCTGAAAATGGCTTGGAGTTCTCAATTGTTAGGCCTTTCAATTGGATCGGTCCTCGGATGGATTTCATTCCTGGAATTGATGGTCCAAGTGAGGGTGTTCCTAGGGTTCTTGCTTGCTTTAGCAATAATCTTCTCAGGGGAGAACCCCTCAAGCTTGTCGATGGTGGCCAATCCCAGAGGACCTTTGTTTACATCAAGGATGCTATTGAAGCTGTCTTACTCATGATTGAAAATCCTGCTAGGGCTAATGGACACATCTTCAATGTGGGTAATCCCAACAATGAGGTTACAGTGAGGCAGCTTGCTGAAATGATGATTAAGGTGTACTCAAAGGTAAGTGGAGAAAAAACTCCTGAAACACCTACAATTGATGTGAGCTCAAAGGAATTTTATGGTGAGGGATATGATGATAGTGACAAGAGAATTCCTGACATGACCATAATAAACAAGCAACTTGGATGGAACCCAAAGACCTCACTTTGGGACCTGCTTGAGTCCACTCTGACCTATCAGCACAGGACTTATGCTGAAGCCATTAAGAAAGTCCTTGCAAAACCTCTTGCAAGTTAA 1173 0.4501 MASSSVRVDLDGNPITPLTICMIGAGGFIGSHLCEKLMSETQHKVLALDVYNDKIKHLLEPESTLPWAGRIQFHRLNIKHDPRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDESPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFSIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRGEPLKLVDGGQSQRTFVYIKDAIEAVLLMIENPARANGHIFNVGNPNNEVTVRQLAEMMIKVYSKVSGEKTPETPTIDVSSKEFYGEGYDDSDKRIPDMTIINKQLGWNPKTSLWDLLESTLTYQHRTYAEAIKKVLAKPLAS* 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g2909 390 CDD Arna_like_SDR_e 19 375 IPR045869 GO:0016831
Aev04g2909 390 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 19 373 IPR036291 -
Aev04g2909 390 Pfam NAD dependent epimerase/dehydratase family 20 291 IPR001509 -
Aev04g2909 390 PANTHER BIFUNCTIONAL POLYMYXIN RESISTANCE PROTEIN ARNA 6 389 - -
Aev04g2909 390 Gene3D - 18 381 - -
Aev04g2909 390 PANTHER - 6 389 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g2909 Aev-Chr4 28870141 28872947 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g2909 K12449 - gmx:100811095 748.429
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev04g2909 04 28870141 28872947 Aev04g2909 04 28870141 28872947 ECH
Aev10g1975 10 21037369 21040019 Aev04g2909 04 28870141 28872947 PCT