Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g2904 ATGGAGCAACAGAACAGTACTATCACTCACAACACTGTTTTGGAGCACACCAATCCCAACCTGAATGACATGGCACCAGAGGCACCAAAACCAATGGCGATTGTCGTGGGAGCAGGATCAGGATCGGAGTCTGTGCTAAGGTCCGAGGTTAGAGGTTCAGAGATGCAGCCGGTGAAAAGGGGAAGAGGGAGGCCTAGGAAGTACAATATCAATGGAGGACTCAGGAGTCCCACATCAGCCCCACCAGGATTTGCAGCCTCCAATCGCGAGGCTTTCGAGACCCCTATTGCTAAGAGAGGCAGAGGAAGGCCCCGTGGTTCAGGAAAACTGCAAATCCTAGCTTCCCTTGGTGGGAATGTTGCTGAAACTGCTGGGGGAAACTTCACACCTCATGTGGTTACTGTGAACATTGGAGAGGATGTGGTGAACAAGATATTAGCATTTTTTCAGAAAGGGCCTCAATCTGTTTGCATTCTCTCTGCTACTGGTTCTGTGTCAAGTGTTGTCCTTCGCCAACCCAATGTTCCTGGTGGTCTTTTGAAATATGAGGGTCGGTTTGAGATTTTATCCTTAGGTGGATCATGCGCCTACACTGGTTGCAGTGGTGGTGGAAGTCGCAAAGAAGGAGTGCTTAGTATTTCTCTGGCAAAACCTGATGGAAGGGTCTTTGGTGGTGCCATTGACAGTGCTTTGATTGCAGCTGGCCCAATTCAGCATTACATCAATTCCGATAATCCTTACCATGGCCAAAAGCTCCATTCCCAGATTCTGAAATCTGGGTTTGTTCCAAACACTAATGTTTCCATAAAACTACTTATATTGTATTTAAAATGCAATTATTTAAGATATGCACACCAGGTGTTTGATAGTTTGCGTGAGAAAACTTTGTCTGCTTATAACTATATGATTGGTGGCTATCTCAAACAAGGGAAAGTCGAAGAATCACTTAGCTTGGTGCATAGGCTTTTAGTGTCTGGTGAAAAACCTGATGGGTTTAGTTTTTCAATGGTGTTAAAGGCGTCTACTTTGGGGGGTAATGTTGTGCTGGTTAGTGATTTAGGAAGAGTAGTACATGCCCAGATAATCAAGTCTGCTGTTGAGAAGGATGATGTTCTTTGTACCTCACTGATTGATTCTTATGTTAAGAATGGGAGGATTGGTTCTGCTAGGACTGTGTTTGAAGTGATGTCAGAGAAGAATGTCGTATGCTCGACATCCCTTATCTCGGGTTACATGAATCACGGCGCTGTTGAAGATGCAGAATGTATCTTTCACAAGACATTGGACAAGGACATAGTGGTTTTTAATGCAATGATTGAAGGCTACAGCAAAACATCCGAATTTTCCATGAAATCTCTTGAAACTTACATTGAGATGCAGAGATTGAACTTTAGGCCAAATGTTTCTACGTTTGCTAGCATAATTGGTGCTTGTTCAATGCTTGCATCATTTGAAATCGGTCAGCAAGTACAAGGCCAGCTGATGAAGACTCCTTTTTTAACTGACATAAAATTAGGAAGTGCTCTTATAGACATGTATTCCAAATGTGGAAGAATTATAGATGCTAGAAGAGTTTTTGATCATATGGTTGAGAAGAATGTTTTTTCATGGACATCAATGATTGATGGATATGGGAAGAATGGGTTACCTGAAGAAGCACTTGAGCTATTCCAAAATATGCAGAAAGATTACTTTATTTTACCCAATTTTGTGACAATCCTCAGTGCTCTCTCAGCTTGTGCACATGCTGGGCTGGTAAATAAGGGTTGGGAGATCTTTCAGAGTATGGAGAATGAATACTTGGTAAAACCAGGGATGGAGCACTATGCTTGCATGGTTGACCTATTCGGACGAGTTGGGATGCTGAATCGGGCATGGGAGTTTGTCATGACGATGCCGGAGAAACCCAATTCTGATGTGTGGGCTGCTTTATTGAGTTCTTGCAGACTCCATGGTAATATAGAGATGGCAAAATTAGCTGCAAATGAGCTCTTTAAGCTGAATGTTGATGAAAGACCAGGTGCATATGTTGCACTATCTAATACTTTGGCTGATGCTGGGAAATGGGATAGCGTAAGTGAGCTTAGAGAAATAATGAAGCAGAGAGGAATCTCTAAGGACACTGCCTGCAGTTGGGTTGGAATTGATTGTGTTTCTTAA 2160 0.4287 MEQQNSTITHNTVLEHTNPNLNDMAPEAPKPMAIVVGAGSGSESVLRSEVRGSEMQPVKRGRGRPRKYNINGGLRSPTSAPPGFAASNREAFETPIAKRGRGRPRGSGKLQILASLGGNVAETAGGNFTPHVVTVNIGEDVVNKILAFFQKGPQSVCILSATGSVSSVVLRQPNVPGGLLKYEGRFEILSLGGSCAYTGCSGGGSRKEGVLSISLAKPDGRVFGGAIDSALIAAGPIQHYINSDNPYHGQKLHSQILKSGFVPNTNVSIKLLILYLKCNYLRYAHQVFDSLREKTLSAYNYMIGGYLKQGKVEESLSLVHRLLVSGEKPDGFSFSMVLKASTLGGNVVLVSDLGRVVHAQIIKSAVEKDDVLCTSLIDSYVKNGRIGSARTVFEVMSEKNVVCSTSLISGYMNHGAVEDAECIFHKTLDKDIVVFNAMIEGYSKTSEFSMKSLETYIEMQRLNFRPNVSTFASIIGACSMLASFEIGQQVQGQLMKTPFLTDIKLGSALIDMYSKCGRIIDARRVFDHMVEKNVFSWTSMIDGYGKNGLPEEALELFQNMQKDYFILPNFVTILSALSACAHAGLVNKGWEIFQSMENEYLVKPGMEHYACMVDLFGRVGMLNRAWEFVMTMPEKPNSDVWAALLSSCRLHGNIEMAKLAANELFKLNVDERPGAYVALSNTLADAGKWDSVSELREIMKQRGISKDTACSWVGIDCVS* 720
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g2904 719 SMART AT_hook_2 98 110 IPR017956 GO:0003677
Aev04g2904 719 SMART AT_hook_2 59 71 IPR017956 GO:0003677
Aev04g2904 719 MobiDBLite consensus disorder prediction 1 20 - -
Aev04g2904 719 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 369 403 IPR002885 -
Aev04g2904 719 CDD DUF296 129 233 IPR005175 -
Aev04g2904 719 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 502 532 IPR002885 -
Aev04g2904 719 PANTHER PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN 229 715 - -
Aev04g2904 719 PANTHER BNAC03G58820D PROTEIN 229 715 - -
Aev04g2904 719 Pfam PPR repeat 576 598 IPR002885 -
Aev04g2904 719 Pfam PPR repeat 404 429 IPR002885 -
Aev04g2904 719 Pfam PPR repeat 507 534 IPR002885 -
Aev04g2904 719 Pfam PPR repeat 371 401 IPR002885 -
Aev04g2904 719 Pfam PPR repeat 535 563 IPR002885 -
Aev04g2904 719 Pfam PPR repeat 298 326 IPR002885 -
Aev04g2904 719 Pfam Plants and Prokaryotes Conserved (PCC) domain 130 242 IPR005175 -
Aev04g2904 719 Pfam E motif 651 713 IPR046848 -
Aev04g2904 719 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 431 466 IPR002885 -
Aev04g2904 719 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 533 567 IPR002885 -
Aev04g2904 719 SUPERFAMILY AF0104/ALDC/Ptd012-like 127 253 - -
Aev04g2904 719 TIGRFAM PPR: pentatricopeptide repeat domain 371 404 IPR002885 -
Aev04g2904 719 TIGRFAM PPR: pentatricopeptide repeat domain 535 563 IPR002885 -
Aev04g2904 719 TIGRFAM PPR: pentatricopeptide repeat domain 508 534 IPR002885 -
Aev04g2904 719 TIGRFAM PPR: pentatricopeptide repeat domain 298 330 IPR002885 -
Aev04g2904 719 TIGRFAM PPR: pentatricopeptide repeat domain 433 468 IPR002885 -
Aev04g2904 719 MobiDBLite consensus disorder prediction 1 19 - -
Aev04g2904 719 Pfam PPR repeat family 430 478 IPR002885 -
Aev04g2904 719 ProSiteProfiles PPC domain profile profile. 125 264 IPR005175 -
Aev04g2904 719 Gene3D - 130 256 - -
Aev04g2904 719 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 295 329 IPR002885 -
Aev04g2904 719 Gene3D Tetratricopeptide repeat domain 451 598 IPR011990 GO:0005515
Aev04g2904 719 Gene3D Tetratricopeptide repeat domain 350 450 IPR011990 GO:0005515
Aev04g2904 719 Gene3D Tetratricopeptide repeat domain 600 714 IPR011990 GO:0005515
Aev04g2904 719 MobiDBLite consensus disorder prediction 45 88 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g2904 Aev-Chr4 28818153 28824294 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev04g2904 244 715 Glycoside Hydrolase AT3G49170 34.029 7.53e-82 276
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g2904 - - gmx:100816489 807.749