Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g2893 ATGCACACTCTCTCCCCGCCGTATTCCAACACTCTCAGCTATGCAATCCGGGCGCGTGGCGGCGACCAGTTGAAACAACGGGTCGGGGCGACCCGAGTTGCAGTTAAGTGTGGGTATGGATTCGAATCTGCGAACCTTTCGCAGGGATTCGGATCTTCCCGCACTGACTGGCAGAGCGCGTGCGCTATACTCTCCAGCAAGGTGGACTCGCAGCAGGAGGACTCGTCCACCGCCGCTGCTGCCGGAAACGGCGGCGCTGCCGTGAACGGTCACAAATCAGCCGTTACGGATCTGAACATCGTCCACGTCGGCGAGAAACCGCTCCCGCCGAAGCCGCTAACGATCTCCGACCTATCGCCAGCGCCGATGCACGGCTCTCAGCTGCGCGTGGCGTACCAGGGAGTACCCGGAGCTTACTCCGAGGCCGCCGCCGGCAAAGCCTACCCTAACGGAGAAGCCATACCTTGCGATCAATTCGAGGTAGCGTTTCAAGCCGTGGAACTCTGGATCGCAGATCGCGCCGTTCTCCCGGTTGAAAACTCCCTCGGCGGCTCGATCCACCGGAACTACGACCTCCTCCTCCGCCACCGCCTCCACATCGTCGGCGAAGTCCAGCTCCCCGTCCACCACTGCCTCCTCGCCCTCCCTGGCGTCAGATCCGAGTACCTCGCGCGCGTGATCTCTCACCCTCAGGCACTCGCGCAGTGCGAGCACACTCTCACGAAGCTAGGACTCAACGTGGCGCGCGAGGCCGTCGACGACACCGCCGGCGCCGCGGAGTTCGTCGCCGCCAACAACCTCCGTGACACGGCGGCGATCGCAAGCGCACGCGCGGCGGATCTGTACGGACTCCAGATCCTAGCCGACGGAATCCAGGATGACCCGAATAACGTGACCCGGTTCGTTATGTTAGCCCGAGAACCCATAATTCCGCGGACGGATCGTCCTTTTAAAACGAGCATCGTCTTCGCGCACGATAAAGGGACTTCGGTGCTTTTTAAGGTGCTCTCGGCGTTCGCGTTTAGGAACATCAGTTTGACGAAGATAGAGTCGAGGCCGCATCGTAACCGTCCGATCAGGGTGGTTGATGATGAGAGTGAAGGGACAGCGAAGCACTTTGAGTATATGTTCTATGTGGATTTTGAGGCGTCCATGGCTGAGGTTAGAGCACAGAATGCGCTTGCAGAGGTTCAGGAATTCACGTCCTTCTTGAGGGTTTTGGGAAGTTACCCTATGGATATGACGCCTTGGAGTCCTTCGGGTTCTTCTCACCGGGCAGATTAA 1284 0.595 MHTLSPPYSNTLSYAIRARGGDQLKQRVGATRVAVKCGYGFESANLSQGFGSSRTDWQSACAILSSKVDSQQEDSSTAAAAGNGGAAVNGHKSAVTDLNIVHVGEKPLPPKPLTISDLSPAPMHGSQLRVAYQGVPGAYSEAAAGKAYPNGEAIPCDQFEVAFQAVELWIADRAVLPVENSLGGSIHRNYDLLLRHRLHIVGEVQLPVHHCLLALPGVRSEYLARVISHPQALAQCEHTLTKLGLNVAREAVDDTAGAAEFVAANNLRDTAAIASARAADLYGLQILADGIQDDPNNVTRFVMLAREPIIPRTDRPFKTSIVFAHDKGTSVLFKVLSAFAFRNISLTKIESRPHRNRPIRVVDDESEGTAKHFEYMFYVDFEASMAEVRAQNALAEVQEFTSFLRVLGSYPMDMTPWSPSGSSHRAD* 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g2893 427 Pfam Prephenate dehydratase 130 308 IPR001086 GO:0004664|GO:0009094
Aev04g2893 427 Gene3D - 130 302 - -
Aev04g2893 427 ProSiteProfiles Prephenate dehydratase domain profile. 129 306 IPR001086 GO:0004664|GO:0009094
Aev04g2893 427 ProSitePatterns Prephenate dehydratase signature 2. 346 353 IPR018528 GO:0004664|GO:0009094
Aev04g2893 427 CDD PBP2_Ct-PDT_like 129 308 - -
Aev04g2893 427 PANTHER PREPHENATE DEHYDRATASE P PROTEIN 26 420 - -
Aev04g2893 427 Gene3D - 209 295 - -
Aev04g2893 427 SUPERFAMILY Periplasmic binding protein-like II 129 312 - -
Aev04g2893 427 PANTHER AROGENATE DEHYDRATASE 26 420 - -
Aev04g2893 427 CDD ACT_CM-PDT 318 411 - -
Aev04g2893 427 ProSiteProfiles ACT domain profile. 320 411 IPR002912 -
Aev04g2893 427 SUPERFAMILY ACT-like 301 413 IPR045865 -
Aev04g2893 427 ProSitePatterns Prephenate dehydratase signature 1. 282 304 IPR018528 GO:0004664|GO:0009094
Aev04g2893 427 Gene3D - 313 414 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g2893 Aev-Chr4 28715223 28716506 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g2893 K05359 - gmx:100809331 691.419
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev04g2893 04 28715223 28716506 Aev04g2893 04 28715223 28716506 ECH