Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g2837 ATGCAATGTTTTTGTTCTCCATGGGACCTTGAACTTGAAGTCGAAGATCTACTAAGAAAGGCAGAGGCATCATCACCACCATCATCATCAGCAGAGAATACAGTTCTCCTCCTCCTTCCAGAATCTTCTGGAAAGTTCTACGCCGATTTTGCGATGGCCATCCTCTACGCCTTGGTGGCCAGAGGCACGGTGGTGCTGGCGGAGTTCAGCGCCGTCACCGGAAACACCGGCGCCGTCGCTCGCCGCATCCTCGAGAAGCTTCCGGTGGAGGCCGATTCCAGACTCTGCTTCTCTCAGGATCGTTACATCTTCCACATACTCCGATCCGATGGCCTCACCTACCTCTGTATGGCCAACGATACCTTCGGAAGGAGAATACCTTTTTCGTACTTGGAAGATATCCAAATGAGGTTTATGAAGAACTATGGAAGAGTGGCCAATTACGCACCAGCTTATGCAATGAATGATGAGTTCTCAAGGGTTCTGCATCAACAAATGGAATTTTTTTCTAGTAGCTCTAGCGCCGATACCCTCAATCGCGTTCGGGGTGAAGTTGGTGAGATACGCACTATCATGGTGGACAATATTGAGAAAATATTAGAGAGAGGTGACAGGATTGAGCTTCTTGTTGATAAGACAGCAACAATGCAAGACAGTGCATTTCACTTTAGAAAACAGTCAAAGCGCCTCCGAAGAGCCCTTTGGATGAAAAATTTCAAACTCTTTTACATGCTGGATCCTGATAAGGTGGCTGGTGAAAATGTTAAGGATGTTCATGCTCTGCTGGTAACGTGTGAGTTGGTTTGGTTGGTTAAAGAAGAGGTACTGTCGGAGTGGCCTAATGCACTGGCGGATTCTGCTCTGATTGGCATCCTCATTGTGGCGGCGATGCTGGCGATGGTTATGGTGGCTCACCATGGTAGGGAGCAACCTGTGGCGGCAAATATAGAGTTGGAGTTGATCAATATGGCGGAAAAGGCGGTCCACACGGTGCCGGCACTGCAGATGAGGGTGGTAGCGATGGAGCTCATAGTTGCGACTTGCGAGACTTTGCGTTGTGTCTCTGATCTTCTGCTCGAATCGAGTTTTCTCTCATTTCCCTCCAAGACTCATGCTCGATATCCTCAAACTCGCGTGACATTCGCTCTTTATGAGCTGAAAATCGAAGCGATGAGGCAAATTCATCTTCCTGAGCCTCAAAGCCCTACGGCCAGGAGTAGGGGTACTCCGGAGATCTTCGAATCTGGAGTCCACACGTTCATCAGACGCGCCGTCATAATCGGAAACGGTTTTTCAGCTTCGGAGAATCAGAGCATCGGGTTGGTTCGCGCCCTTGGCCTCTCCGATAAACATGTCTTATATCGAGTTTCTAGGCCGAAAGGGGGAATCAATGAGTGGCTTCAATGGCTTCGTGTCTCTTTCCATAAAAAAATAGACTACATATTAAAGCTGCTCCGAGTTTACTCGCAATTTCTTTTGCAATCTCAAGAAAAGAAGCTTATGCCTTCACCTTCAGAAAATGGTGTAAGTGCGGGCTTGTCAGCTGTTTTAGAAGCTGATGTAAACCAGATAGTAAATTTGGCTCGTGAAACTTATGAGAAGGAGGGACCTTCATTGGTGGTTGCATCCGGAAGAGATACCATTTCTACTGCAAGTTCTATAAAATGCTTAGCATCAGATAAGGTTTTTGTTGTTCAGATTCAACATCCAAGATTGCATTTGAATAGGTTTGACATGGTTCTTACACCTAAGCATGATTATTATCCTTTGACTCCAGAAGGTCAGAAACAGGTTCCTCGGTTTCTACGAAGTTGGATAACTCCACGAGATCCTCCAGATAGTCATGTGGTTCTCACCATGGGAGCTATACATCAAATAGATTTTACTTCAATTCGCAGTGCTGCCATTTCATGGCATGATGAGTTCGCACGTATTCCCAGGCCCTTGCTCGTCGTCAATATTGGAGGACCAACACGCAACTGTCGATATGGTGTAGACCTTGCCAAGCAGCTAGCAACCTCTTTGCTCAGTGTTCTTGTTAGTTGTGGGAGTGTGAGAATATCCTTTTCAAAGAAGACTCCACAAAAGGTGTCCGATGTTATAGTAAAAGAACTTGGGAATCATCCCAAAATTTATATTTCAGATGGGCAAGAATCAAACATGCACATAGACAATCTAGCTTGGGCCGATGCATTTGTTGTTACAGCAGATTCAGTTAGCATGATTAGTGAAGCTTGCAGCACTGGGAAGCCTGGCTATGTTGTTGGAGCCGAGCGATGCAGATGGAAGTTCACAGAATTCCACAAATCATTAAGAGATCAGGGGGTTGTTAGGCCTTTTTCAGGTTCTGAGGATATATCAGAAAGTTGGAGCTATCCACCCCTTAACGACACGGCTGATGCCGCCAAACGGGTTCATGAAGCGCTTGCTGCCCGCGGGTGGAAACTTAAGATTTAG 2457 0.4644 MQCFCSPWDLELEVEDLLRKAEASSPPSSSAENTVLLLLPESSGKFYADFAMAILYALVARGTVVLAEFSAVTGNTGAVARRILEKLPVEADSRLCFSQDRYIFHILRSDGLTYLCMANDTFGRRIPFSYLEDIQMRFMKNYGRVANYAPAYAMNDEFSRVLHQQMEFFSSSSSADTLNRVRGEVGEIRTIMVDNIEKILERGDRIELLVDKTATMQDSAFHFRKQSKRLRRALWMKNFKLFYMLDPDKVAGENVKDVHALLVTCELVWLVKEEVLSEWPNALADSALIGILIVAAMLAMVMVAHHGREQPVAANIELELINMAEKAVHTVPALQMRVVAMELIVATCETLRCVSDLLLESSFLSFPSKTHARYPQTRVTFALYELKIEAMRQIHLPEPQSPTARSRGTPEIFESGVHTFIRRAVIIGNGFSASENQSIGLVRALGLSDKHVLYRVSRPKGGINEWLQWLRVSFHKKIDYILKLLRVYSQFLLQSQEKKLMPSPSENGVSAGLSAVLEADVNQIVNLARETYEKEGPSLVVASGRDTISTASSIKCLASDKVFVVQIQHPRLHLNRFDMVLTPKHDYYPLTPEGQKQVPRFLRSWITPRDPPDSHVVLTMGAIHQIDFTSIRSAAISWHDEFARIPRPLLVVNIGGPTRNCRYGVDLAKQLATSLLSVLVSCGSVRISFSKKTPQKVSDVIVKELGNHPKIYISDGQESNMHIDNLAWADAFVVTADSVSMISEACSTGKPGYVVGAERCRWKFTEFHKSLRDQGVVRPFSGSEDISESWSYPPLNDTADAAKRVHEALAARGWKLKI* 819
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g2837 818 PRINTS Synaptobrevin signature 202 221 IPR001388 GO:0016021|GO:0016192
Aev04g2837 818 PRINTS Synaptobrevin signature 182 201 IPR001388 GO:0016021|GO:0016192
Aev04g2837 818 SUPERFAMILY SNARE-like 54 168 IPR011012 -
Aev04g2837 818 ProSiteProfiles v-SNARE coiled-coil homology domain profile. 177 237 IPR042855 -
Aev04g2837 818 Pfam Mitochondrial fission ELM1 435 809 IPR009367 -
Aev04g2837 818 Pfam Regulated-SNARE-like domain 80 159 IPR010908 -
Aev04g2837 818 SMART Longin_2 79 161 IPR010908 -
Aev04g2837 818 CDD Longin 55 169 IPR010908 -
Aev04g2837 818 Gene3D - 174 241 - -
Aev04g2837 818 Pfam Synaptobrevin 175 244 IPR042855 -
Aev04g2837 818 SUPERFAMILY SNARE fusion complex 173 239 - -
Aev04g2837 818 PANTHER OS02G0535700 PROTEIN 391 817 IPR009367 -
Aev04g2837 818 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 525 757 - -
Aev04g2837 818 PANTHER MITOCHONDRIAL FISSION PROTEIN ELM1 391 817 - -
Aev04g2837 818 Gene3D Longin domain 36 173 - -
Aev04g2837 818 ProSiteProfiles Longin domain profile. 58 162 IPR010908 -
Aev04g2837 818 ProSitePatterns Synaptobrevin signature. 195 214 IPR001388 GO:0016021|GO:0016192
Aev04g2837 818 CDD R-SNARE 176 235 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g2837 Aev-Chr4 28112482 28125867 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev04g2837 52 245 Miscellaneous Gene Families AT5G22360 85.641 1.85e-116 350
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g2837 - - gmx:100777791 732.635
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev04g2837 04 28112482 28125867 Aev04g2837 04 28112482 28125867 ECH