Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g2834 ATGGATACCCTTTCTAGGATTGGGTTCCTACCCAATTGCTGTTACAGCGTTCAATTCCCAAGAATTCCTTCATCATCTCGTTTCCCTTGTGCTTTTCCCTCACCAACTACTCCTCTGCTTTCTGTACTAAGGGCTGGTCCTCCTTCAGTGAGTGGCATAGATGAAGATGTCTTGCAAACTTTTTTTAAGGAGAGAGAATTAAACGGGGATTTCATATCAAGAGCTTCTGATTTACTGTGGCGAAGGAATTTCAGAAATTCTGTTGATTCCGATATTAGCAAACTCGCTGACAGCACTCCTCAACAAACAGAACAGATCATAGAGACCAACAGTGATGGTGGTTTTTTGAAACTTTCAAGTACCCAAGAATGGCTATTAGGTGACAATTCTGCACCAATAAACAAGAAAGTGGCTGCTAAGATGTTGCAGGACAGCAGCGAAAGACGGAAAAAATTGAACATGCTTAGATATGAATCTCTCAAGCAGGAAATACTGCTTCTATCTGTTGGTATTGGACTGGCTTGTAGTGGATATTGTTTGATAACTTTATCAGTACAGGCAGCTGTAAGTTACGTGATTGGAGTTCTTTTCAGTTGCTTGTACCTTCAGCTCTTGTATCAATATGCCGACAACCTGTCAAGTGAAGCTGTTCCTGAAATATTCAGGAAAAAGAAGCCAAAGAAAATTGGTATAAGAAGTGAGGACCTTCAAGATGCGTTGGAGAGGTCAATCAAGGGCACTAGCATATCACTTTCATCTCCAAGGCTTGTGATTCCAGCATCAATTTTTGGACTTTGGATTCTGTCTCATCGGTATTTTATCAACGACTTCTTCGATTTTCAGATTGTGCCAGCCATGTTTGGGATGTTTGTCTACAAGGCTGCGGTTCTAGTGCAAGTTTATAGAGACAATGAAGACTTACAAAAAACCCTAGATCGGAGCCAGATCTCGGTGGCCATGGCAGCGAGAAAATCTCCGCGAGAGCGCGGAATGCTGGTTCTGGATTCGGTGGTGGCGCTGGTGCTGGTGCTGGTGGCTTGCGTCGAGCTCTGCGACGGCGCCACCGTTGTCGACGTGTACAGGCTCATACAGTACGACATGTCCGGCGTCCCCTTCGGATCTCGACTTGCCGGACTCAACCACCACGCCGCTTCGCTCCACTTCTCGCCGCACGCTGATCTCTCCCGCACTGTTCTCCTCATCCCTCTCCGCGACCTCAATATCTCCTTCGTCAAAGAATATATTGGTGAAGGCAAGCCTCTGGGGGGTTTATTATTTCTGCTGCCTCAGATGTTCAATTTTGAAAACAAAGGTGGTGTGGGAAGTAACCATCTAGATGGAAGCAAAGAGTTGCTGAAGAATGTGTTGGATGAAGTTGAACAAATACTAATACACGCCAACTTACCCTATCCTGTTTATTTTGCTTTTGAGGATGACAATATTAATGCTGTCTTAGCTGATATCAAGAAGAGTGATGTCACTGGTCAGCCTGCTACTGCAACTACTGGCGGATATAAATTTGTAGTTTCTACTCCAGAACCAAAGAAAGTTGCATCTCCTCCTCTTACAAATATCCAGGGATGGTTGGCAGGACTGAAGACAGGTGATGATGCTCATCAATTACCTACCATTGCTATAGTGGCATCATATGACACCTTTGGGGCTGCTCCTGCATTATCAGTGGGAAGTGATAGCAATGGAAGTGGGGTTGTGGCTCTTCTTGAAGTAGCTAGGTTGTTTTCTCTTCTGTATTCTAATCCAAAGACAAGAGGACAATACAATCTGTTGTTTGGGCTGACATCTGGTGGGCCTTACAACTACAATGGAACTCGTAAGTGGCTTCGGAGCTTTGACCAACGACTGCGTGAGAGCATTGACTATGCTATTTGCCTAGATAGTATTGGCTCATGGGAAAATGAATTGTGGATTCATGTCTCTAAGCCTCCAGAAAATGCTTACATTAAGCAAATTATGGAAGATTTTTCAAGTGTTGCAGAAGAGTTGGGCTTTAAAGTGAATCTGAAGCATAAGAAAATAAATATTTCAAATCCTCGAGTAGCTTGGGAGCATGAACAGTTTTCAAGGCTGAGAGTTACTGCTGCCACTCTATCCGAACTCTCTGCTGCACCTGAACTGCTAGAAAGAACTGGTGGTTTGGTTGATAGCAGGCATTTTGTCGATGAAAAGGCCATTATCAGAAGTGTAAAGCTAATTGCTGAGAGTCTTGCGAGGCATATTTATGGACATCAAGGAAAGAGCATTCAAATCTTTGCAGACAATAGTAACTTGGCTGTAAATCCTTCTTATGTTAGGTCATGGTTAGACGTTTTGTCTCAAACACCTCGAGTGGCACCGTTTTTCTCTAAAGATGATCCTTTTGTCATGGCACTGAAAAAGGAATTGGAAGACCATACAGATGATGTCAATGTACAACGTGAAGTGCTAGATGGCATGTTCACTTTTTATGATTCAACGAGGGCCAAACTGAACATATATCAGGTTGCCAGTGTAACATTCGACTTGCTGTTGCTTCTTGTATTGGGATCGTATTTAATTGTGCTCTTCAGTTTCTTGGTCATCACAACAAGGGGTCTCGATGATCTAATCAGTTTATTCAGGCGGCCTCCCTCGCGAAAAGTGAAGACAGCGTAG 2652 0.4359 MDTLSRIGFLPNCCYSVQFPRIPSSSRFPCAFPSPTTPLLSVLRAGPPSVSGIDEDVLQTFFKERELNGDFISRASDLLWRRNFRNSVDSDISKLADSTPQQTEQIIETNSDGGFLKLSSTQEWLLGDNSAPINKKVAAKMLQDSSERRKKLNMLRYESLKQEILLLSVGIGLACSGYCLITLSVQAAVSYVIGVLFSCLYLQLLYQYADNLSSEAVPEIFRKKKPKKIGIRSEDLQDALERSIKGTSISLSSPRLVIPASIFGLWILSHRYFINDFFDFQIVPAMFGMFVYKAAVLVQVYRDNEDLQKTLDRSQISVAMAARKSPRERGMLVLDSVVALVLVLVACVELCDGATVVDVYRLIQYDMSGVPFGSRLAGLNHHAASLHFSPHADLSRTVLLIPLRDLNISFVKEYIGEGKPLGGLLFLLPQMFNFENKGGVGSNHLDGSKELLKNVLDEVEQILIHANLPYPVYFAFEDDNINAVLADIKKSDVTGQPATATTGGYKFVVSTPEPKKVASPPLTNIQGWLAGLKTGDDAHQLPTIAIVASYDTFGAAPALSVGSDSNGSGVVALLEVARLFSLLYSNPKTRGQYNLLFGLTSGGPYNYNGTRKWLRSFDQRLRESIDYAICLDSIGSWENELWIHVSKPPENAYIKQIMEDFSSVAEELGFKVNLKHKKINISNPRVAWEHEQFSRLRVTAATLSELSAAPELLERTGGLVDSRHFVDEKAIIRSVKLIAESLARHIYGHQGKSIQIFADNSNLAVNPSYVRSWLDVLSQTPRVAPFFSKDDPFVMALKKELEDHTDDVNVQREVLDGMFTFYDSTRAKLNIYQVASVTFDLLLLLVLGSYLIVLFSFLVITTRGLDDLISLFRRPPSRKVKTA* 884
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g2834 883 CDD M28_nicalin_like 456 749 - -
Aev04g2834 883 SUPERFAMILY Zn-dependent exopeptidases 508 727 - -
Aev04g2834 883 Pfam Nicastrin 544 681 - -
Aev04g2834 883 PANTHER NICALIN 329 882 - -
Aev04g2834 883 PANTHER NICALIN 329 882 IPR016574 GO:0009966|GO:0016020
Aev04g2834 883 ProSitePatterns EF-hand calcium-binding domain. 564 576 IPR018247 -
Aev04g2834 883 Gene3D Zn peptidases 469 743 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g2834 Aev-Chr4 28073050 28086131 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev04g2834 320 881 EF-hand Containing Proteins AT3G44330 72.792 0.0 842
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g2834 - - gmx:100779713 973.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev04g2834 04 28073050 28086131 Aev04g2834 04 28073050 28086131 ECH