Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g2827 ATGATCACATTAGCAAGTTCACGAGTACTTCTAGTGAAGAACACACACTCCTTTCCTTTGCTAAAATCCAGAAACGAAAAAGTCTCACATATGGCAACTACTTCATCATTGGTCTCAGCTGCTTTCAAAAGGCTTGAAGGGAAGGTGGCCGTGATCACTGGCGGTGCTAGTGGAATAGGTGAAGCCACGGCAAGAGTGTTCTCAAAGCACGGAGCCAAAGTGGTGATAGCTGATATTCAAGACAACTTGGGCAACGCTGTCTGCAAGGAATTGGAAACACCATGTTCCTATGTCCATTGCGATGTGACAAAGGAAGAGGATGTTGAAAATGCTGTGAACACAGCGGTTTCCAAGTATGGCAAACTTGACATCATGTTCAACAATGCTGGCATAACAGGTGTCAACAAGACCAACATACTCGAGAACAAGAAAGACGAGTTCGAGGAAGTAATCAATGTTAACGTTGTTGGTCCGTTTTTGGGAACAAAGCACGCTGCAAGGGTGATGATCCCAGCAAGAAGGGGCAGCATAATCAACACCGCTAGTATCTGCGGTTGCACAGGTGGAGTGGCTTCACATGCCTACACAACTTCAAAGCATGCCGTAGTTGGTTTGACTAAGAACACTGCGGTGGAGCTTGGACAATTCGGCATAAGGGTCAATTCTGTGGCACCATATATTGTTGCCACCACACCCTTGGCTAAGAATTTCTTTAATTTTGATGAGGAGCAAGGCCTTGGAGTCTATAACAACCTCAAAGGTACTAATCTTGTGCCTAAGGATGTGGCTGAAGCTGCTCTTTACTTGGGAAGTGATGAGTCTAAGTTTGTTAGTGGTCATAATCTTGTCATTGATGGAGGGTTTACTGTGGTGAATGCTGGGTTTTGCTTGTATGGGCCATCTCAATGA 909 0.451 MITLASSRVLLVKNTHSFPLLKSRNEKVSHMATTSSLVSAAFKRLEGKVAVITGGASGIGEATARVFSKHGAKVVIADIQDNLGNAVCKELETPCSYVHCDVTKEEDVENAVNTAVSKYGKLDIMFNNAGITGVNKTNILENKKDEFEEVINVNVVGPFLGTKHAARVMIPARRGSIINTASICGCTGGVASHAYTTSKHAVVGLTKNTAVELGQFGIRVNSVAPYIVATTPLAKNFFNFDEEQGLGVYNNLKGTNLVPKDVAEAALYLGSDESKFVSGHNLVIDGGFTVVNAGFCLYGPSQ* 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g2827 302 PANTHER 3-OXOACYL-(ACYL-CARRIER-PROTEIN) REDUCTASE (AFU_ORTHOLOGUE AFUA_6G11210) 38 295 - -
Aev04g2827 302 Pfam Enoyl-(Acyl carrier protein) reductase 54 289 - -
Aev04g2827 302 CDD secoisolariciresinol-DH_like_SDR_c 44 289 IPR045309 GO:0016616
Aev04g2827 302 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 120 131 IPR002347 -
Aev04g2827 302 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 195 214 IPR002347 -
Aev04g2827 302 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 175 183 IPR002347 -
Aev04g2827 302 Gene3D - 34 297 - -
Aev04g2827 302 PRINTS Glucose/ribitol dehydrogenase family signature 169 185 IPR002347 -
Aev04g2827 302 PRINTS Glucose/ribitol dehydrogenase family signature 252 272 IPR002347 -
Aev04g2827 302 PRINTS Glucose/ribitol dehydrogenase family signature 195 214 IPR002347 -
Aev04g2827 302 PRINTS Glucose/ribitol dehydrogenase family signature 216 233 IPR002347 -
Aev04g2827 302 PRINTS Glucose/ribitol dehydrogenase family signature 49 66 IPR002347 -
Aev04g2827 302 PRINTS Glucose/ribitol dehydrogenase family signature 120 131 IPR002347 -
Aev04g2827 302 ProSitePatterns Short-chain dehydrogenases/reductases family signature. 182 210 IPR020904 GO:0016491
Aev04g2827 302 PANTHER MOMILACTONE A SYNTHASE 38 295 - -
Aev04g2827 302 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 46 291 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g2827 Aev-Chr4 28016270 28018509 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev04g2827 42 290 Acyl Lipid Metabolism Gene Families AT3G55290 32.090 1.03e-31 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g2827 - - gmx:100782627 422.55