Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g2826 ATGGTGGAAGGTGCTCGATACCTTAATTTGGGGAGGAGGAATGGGTGTAGACACACTTTCAATGGGGAGACTTTTTCAGTCTTCGTTGATAACATTCCGAGGGCCAAATCTAGAGGGTGGCTTTGGAAGGTGTTTAAGTCTTTCGGATGGGTGGTGAGTACGTTCGTGTCTAGGCGAACTCGTACTAAAAACCCTTTGGCTTTTGGCTTCGTGAGGTTTAAGTCGATGGTGGAATCCAAGAGGGCAGTTGAAGGGACCAACGGCTGGGTAGTCGAAGGGTGCTGCTTGGCTACAAATATAGCAAGGAACAATACAATCAAAAAGGCAAACATGGTGTGGAGGCAGGTGATTAAAAGAAGGGAGGATCACGCTGAGGAAGAGATCAACAATGCTAGTGGAGAGATCCTGACTAGGAACACGGGAGTCCGGAGAGGCACTGATAAATCCTTCTTCTTGAGAGGGATAATTAGTGATGAGAAAAGGGTTCCAATTCGCGGATGGGATGTAGAAAATTTCAAGAACATTGCCAAGCTATGGGGGAGTTACGATGGACATGAGGAGAATGATGATTTCAAATCCATTAGAATACGTGTTATAACCCACTCACAAATGCACATTTATGGATGGGTAACCATGGCTATTGGGGACAACACATGTTCAATATATGTTAAGGAATGTTCCCAGATGGTGAAGGGTGAAGGTAGTGTAAGCGCCCATGATAATGCAAAGCGAATCATCCATGATTTGAGCTCAAGTTGCAACCAAGGTGATGATGATGGAGTTTCGGGTGGTGATGAACAGTCGTTGCCACCAGGGTGTGGGCTGGTCCAAGTAAACGGGCCTTGTGTGGAAGTAGGGCCAGTGGAAAACACACCTGATAGGATGCTTCAAAATACTCCTTCTGGCAAGGAGAGGGGAAGGATTGGGCTCGGAATTGCGCTGGAGCCCAACTCACCTTTAAGTTCGAAAACAAGAACTTGGCAGGATAGCCAGTGCACTGAGTCCATTATAAAACAAAAATATAGGGATAATGGGCTTGGTAAAGGGGCGTCCCAATCAATGAGCTTGGATTTGCCTCCGGGATTTGATTTCTGTAGAGATATTCCCTATACTGGGGAGAATAACCTTGAAGCAGTAACAAACCCTTGCGATCTGAATCATGGGGCCAATGGGGAAAACCCTGAGCAGATAGAAGGGGATTCAAACACCGAACGACAGTGGGAGGAAGAAGAGATCAGGAAGGAGACGGCTATAGCCATTGAAGCTGGTAGAGCTTCGGGATGGCCCATTGATTCGGATGAAGACGTTCTTTACACTAAATCCCTGACTCGAATTAAGAGAAGACAGAAGATTTGGGCGAAAATGATGAAGAAAGCTCTAGCAATGCCCACTCCTGAGTTTTTAAAGAAGGCTAAAAGAAAACTGCAGGGGCATGAAGGGAAATTCTTAAGGAAGAGCGTGACTATCAATAAGGCCATGGTTCAATTAAAAGATTGGAAGATCAGTGAGGTTCACTTAAATGCTAGTTCCAGAATCATTCAACAAGTACTGTCATCAAAGGTATCTTGGACCCTGGCCTCCAAGCTAAGGAGCTTCACAACAAGAACAACCATGGGAAGCCTTTCATTACTCTCTGCTGCAGCTGTTGCCAGGAGACTAGAAGGGAAGGTAGCACTAATCACGGGTGGAGCAAGTGGAATTGGTGAGAGTGCAGCAAGACTATTCACAAAGCACGGAGCCAAAGTGGTTATAGCTGATATCCAAGACGAGTTGGGTCACTCTGTTTGCAAAGACTTAGATTCATCATCATCATCGTCATCATCATCTCCTTCTTCTGCTTCCTATGTTCACTGCGACGTGACGTGCGAAGAACACGTCGCGAACGCAGTGAACACAACCGTTTCCAGACACGGCAAGCTAGACATAATGTACAACAATGCAGGAATAATAGGGGAGTTCAAACAGAGCATATTGGAAAATGAAAAGTCCAATTTTGAAAAAGTGCTTAGTGTTAACTTAGTTGGTGCATTTCTGGGAACAAAACATGCCGCAAGAGTCATGATTCCTCACAAAAGGGGAAGCATAATTTTCACCTCTAGCATTGGTGGAACCATTGGTGGTTTAGCTTCACATGCATATACAAGCTCGAAGCATGCGATTTTGGGGCTTATGAGAAATAGTGCGGTGGAGCTTGGACAATTTGGTATTCGTGTGAATTGTGTGTCACCATATGCAGTGCCTACACCTATGACTCGAAGATACCTTAGTCTTGGTGATGAAGGGTTTGGTGCGCTTTATTCTAATCTTAAAGGTACTGATCTTAAGGCTGAAGATGTGGCTGAAGCTGCTCTTTATTTGGGAAGTGATGAGTCTAAGTATGTTAGTGGACATGATCTTGTTGTGGATGGGGGCTTCACTATTGTGAATAATGGTTTTTGTGTCTTTGGACAATCGGGGTAA 2460 0.4496 MVEGARYLNLGRRNGCRHTFNGETFSVFVDNIPRAKSRGWLWKVFKSFGWVVSTFVSRRTRTKNPLAFGFVRFKSMVESKRAVEGTNGWVVEGCCLATNIARNNTIKKANMVWRQVIKRREDHAEEEINNASGEILTRNTGVRRGTDKSFFLRGIISDEKRVPIRGWDVENFKNIAKLWGSYDGHEENDDFKSIRIRVITHSQMHIYGWVTMAIGDNTCSIYVKECSQMVKGEGSVSAHDNAKRIIHDLSSSCNQGDDDGVSGGDEQSLPPGCGLVQVNGPCVEVGPVENTPDRMLQNTPSGKERGRIGLGIALEPNSPLSSKTRTWQDSQCTESIIKQKYRDNGLGKGASQSMSLDLPPGFDFCRDIPYTGENNLEAVTNPCDLNHGANGENPEQIEGDSNTERQWEEEEIRKETAIAIEAGRASGWPIDSDEDVLYTKSLTRIKRRQKIWAKMMKKALAMPTPEFLKKAKRKLQGHEGKFLRKSVTINKAMVQLKDWKISEVHLNASSRIIQQVLSSKVSWTLASKLRSFTTRTTMGSLSLLSAAAVARRLEGKVALITGGASGIGESAARLFTKHGAKVVIADIQDELGHSVCKDLDSSSSSSSSSPSSASYVHCDVTCEEHVANAVNTTVSRHGKLDIMYNNAGIIGEFKQSILENEKSNFEKVLSVNLVGAFLGTKHAARVMIPHKRGSIIFTSSIGGTIGGLASHAYTSSKHAILGLMRNSAVELGQFGIRVNCVSPYAVPTPMTRRYLSLGDEGFGALYSNLKGTDLKAEDVAEAALYLGSDESKYVSGHDLVVDGGFTIVNNGFCVFGQSG* 820
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g2826 819 PRINTS Glucose/ribitol dehydrogenase family signature 734 751 IPR002347 -
Aev04g2826 819 PRINTS Glucose/ribitol dehydrogenase family signature 687 703 IPR002347 -
Aev04g2826 819 PRINTS Glucose/ribitol dehydrogenase family signature 713 732 IPR002347 -
Aev04g2826 819 PRINTS Glucose/ribitol dehydrogenase family signature 769 789 IPR002347 -
Aev04g2826 819 PRINTS Glucose/ribitol dehydrogenase family signature 557 574 IPR002347 -
Aev04g2826 819 PRINTS Glucose/ribitol dehydrogenase family signature 638 649 IPR002347 -
Aev04g2826 819 Coils Coil 114 134 - -
Aev04g2826 819 SUPERFAMILY RNA-binding domain, RBD 18 104 IPR035979 GO:0003676
Aev04g2826 819 MobiDBLite consensus disorder prediction 287 306 - -
Aev04g2826 819 CDD secoisolariciresinol-DH_like_SDR_c 552 806 IPR045309 GO:0016616
Aev04g2826 819 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 554 808 IPR036291 -
Aev04g2826 819 CDD RRM_SF 27 96 - -
Aev04g2826 819 Pfam Enoyl-(Acyl carrier protein) reductase 562 806 - -
Aev04g2826 819 SMART rrm1_1 26 99 IPR000504 GO:0003723
Aev04g2826 819 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 713 732 IPR002347 -
Aev04g2826 819 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 638 649 IPR002347 -
Aev04g2826 819 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 693 701 IPR002347 -
Aev04g2826 819 PANTHER 3-OXOACYL-(ACYL-CARRIER-PROTEIN) REDUCTASE (AFU_ORTHOLOGUE AFUA_6G11210) 547 812 - -
Aev04g2826 819 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 25 103 IPR000504 GO:0003723
Aev04g2826 819 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 27 96 IPR000504 GO:0003723
Aev04g2826 819 PANTHER MOMILACTONE A SYNTHASE 547 812 - -
Aev04g2826 819 Gene3D - 544 815 - -
Aev04g2826 819 Gene3D - 21 131 IPR012677 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g2826 Aev-Chr4 28002370 28012576 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev04g2826 553 807 Acyl Lipid Metabolism Gene Families AT3G55290 32.319 2.86e-24 101
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g2826 - - gmx:100810754 399.438