Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g2788 ATGGGGAAGAACGAGAGCCATAAGACTGGGCTAGGGAGGGCACTGGTGAAGCAGCACAACAAGATGATCCAGCAGAGCAAGGAGAAGGGTCGATTCTACAAGAAGAAGTTTCTAGAATCATTCACTGAGGTCTCCGACATCGATGCCATCCTCGAACAATCCGAGGAGCCTCAAGAACAAGAACCACTACCTCTCCTCTCTGATCGCACCGCTTCACCTGCTTTTGTCATCAATCTGGATCCGGGGTCTGAGTCTAACGAAATGACAGCTGAAGAAATAAGGAAGCAACAGAAGAGAGAGGAGGCACTGCATGCTAGCAGTCTCCGAGTTCCACGCAGGCCACAATGGAATCCTGAGATGTCTGTTGAGGAGCTTGATGCTAATGAAAGACAATCTTTCTTGACTTGGCGTCGCAGCTTGGCCAGACTAGAGGAAAATAAGACACTTGTCCTCACTCCATTCGAGAAAAATCTTGATATTTGGAGACAGCTCTGGCGGGTTGTTGAACGCAGTGATTTGCTTGTTATGGTTGTTGACTCGCGAGATCCACTGTTCTATCGCTGTCCTGATCTTGAGGCTTATGCACAAGAGGTTGACGAGCATAAACGCACTCTGCTTCTGGTTAATAAGGCAGATCTTTTACCTGCTTCAATCAGAGAGAAATGGGCAGAATATTTTCGAGCTCATGATATTCTCTTCATTTTCTGGTCTGCTAAAGCTGCTACTGCAGCTCTTGAAGGCAAAAAGCTTGGCTCATCATGGGAGGCTGCTAACTTGGGAAGAAGTAATAACCCAGACACAAAGATTTATGGAAGGGACGAGCTTTTGGCTCGCTTGCAATCAGAGGCAGAAAAGATAGTTGAAATGAGAAGAAATTCAAGCTCCTCTGATGCAGGACCATCTAACATCAAATCTCCTGGTGACAATGCTACTAGCAGTTCATCATCAAGTAATGTGATTGTGGGATTTGTTGGATATCCTAATGTTGGGAAAAGTTCAACTATTAATGCTCTGGTTGGTCAAAAAAGGACTGGTGTCACCTCTACTCCAGGGAAAACAAAGCACTTCCAGACCTTAATCATTTCTGAGAAACTGACTCTTTGTGATTGCCCTGGTTTAGTTTTCCCATCATTCTCAAGCTCAAGATACGAGATGGTTGCTTGTGGGGTTTTGCCTATCGATAGGATGACGGAACACAGGGAGTCTGTCCAAGTTGTAGCCGATAGAGTCCCACGACATGTCATCGAGGAGGTTTATAACATCACTCTTCCTAAGCCTAAGCCCTATGAGCCCCAATCTCGGCCCCCTTTGGCATCCGAGCTTCTGAGAGCATATTGCACATCACGTGGGTATGTTGCCTCTAGTGGACTGCCTGATGAAACTCGGGCTGCACGTCAAATACTGAAAGATTACATTGATGGGAAGCTGCCTCACTATCAAATGCCCCCTGGCGTGTCGAATGAGGAACCAGCTTCGGAGGATCAAACAGTACACGACTCGGTTAACTCGAACGAGTCAGACTCATCTGGCATTGAAGAGTGTTCAGATGTTGAGAGTGAAGTTGCACCAAATCTTGAACATGTATTGGATGACCTTACTTTATTTGACATGGCTAATGGACTTGCTGAAAAGAAAGTTACTGTTAAGAAGGCTAAGGCATCTCATAAGCAACATAAGAAGCCTCAGAGGAAGAAAGATCGTTCATGGAGAGCAGGTAATGATGATGGTGATGGGATGCCAGTTTCAAGATTCTTTCAGAAACCAGTAAATACAGGTCCTATGAAGGTGTGA 1791 0.4562 MGKNESHKTGLGRALVKQHNKMIQQSKEKGRFYKKKFLESFTEVSDIDAILEQSEEPQEQEPLPLLSDRTASPAFVINLDPGSESNEMTAEEIRKQQKREEALHASSLRVPRRPQWNPEMSVEELDANERQSFLTWRRSLARLEENKTLVLTPFEKNLDIWRQLWRVVERSDLLVMVVDSRDPLFYRCPDLEAYAQEVDEHKRTLLLVNKADLLPASIREKWAEYFRAHDILFIFWSAKAATAALEGKKLGSSWEAANLGRSNNPDTKIYGRDELLARLQSEAEKIVEMRRNSSSSDAGPSNIKSPGDNATSSSSSSNVIVGFVGYPNVGKSSTINALVGQKRTGVTSTPGKTKHFQTLIISEKLTLCDCPGLVFPSFSSSRYEMVACGVLPIDRMTEHRESVQVVADRVPRHVIEEVYNITLPKPKPYEPQSRPPLASELLRAYCTSRGYVASSGLPDETRAARQILKDYIDGKLPHYQMPPGVSNEEPASEDQTVHDSVNSNESDSSGIEECSDVESEVAPNLEHVLDDLTLFDMANGLAEKKVTVKKAKASHKQHKKPQRKKDRSWRAGNDDGDGMPVSRFFQKPVNTGPMKV* 597
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g2788 596 MobiDBLite consensus disorder prediction 549 566 - -
Aev04g2788 596 PANTHER LARGE SUBUNIT GTPASE 1 HOMOLOG-RELATED 1 565 IPR043358 GO:0003924
Aev04g2788 596 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 159 399 IPR027417 -
Aev04g2788 596 Pfam 50S ribosome-binding GTPase 321 377 IPR006073 GO:0005525
Aev04g2788 596 PRINTS GTP1/OBG GTP-binding protein family signature 321 341 IPR006073 GO:0005525
Aev04g2788 596 PRINTS GTP1/OBG GTP-binding protein family signature 367 382 IPR006073 GO:0005525
Aev04g2788 596 MobiDBLite consensus disorder prediction 476 519 - -
Aev04g2788 596 Coils Coil 272 292 - -
Aev04g2788 596 Gene3D - 380 482 IPR023179 -
Aev04g2788 596 Gene3D - 160 377 IPR027417 -
Aev04g2788 596 MobiDBLite consensus disorder prediction 292 316 - -
Aev04g2788 596 MobiDBLite consensus disorder prediction 496 510 - -
Aev04g2788 596 PANTHER GTPASE LSG1-1 1 565 - -
Aev04g2788 596 MobiDBLite consensus disorder prediction 1 22 - -
Aev04g2788 596 MobiDBLite consensus disorder prediction 288 316 - -
Aev04g2788 596 ProSiteProfiles Circularly permuted (CP)-type guanine nucleotide-binding (G) domain profile. 161 376 IPR030378 GO:0005525
Aev04g2788 596 CDD HSR1_MMR1 160 376 - -
Aev04g2788 596 MobiDBLite consensus disorder prediction 546 596 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g2788 Aev-Chr4 27698418 27702506 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g2788 K14539 - gmx:100817523 956.051