Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g2730 ATGAACAACGTTCAGAAGATGCGAATTGCATTCACGATAGCAACTGTAGCAACTATCTGCATCTTCCTCACTGCACGGAACCGTAGAAGGAGGCGTAACCGCCATAACTCACATTCGACTTCGTGTTATTTGCATTCCGAAGCGAAGCCACAGAGCGTATTTAAGCGAGTCTTAGCGGATAATTCATACACTCCTTTTAAGCACTTGAAGAAGCTCAGTGATTCTTCTTCTTCTAGCGACGAGAATGCTTCAAATGCACATCCATTTGAGTCAGAGATTATGGAATTGTTAAAAAACCCTCTGCCTGAAATTGAAGTTAGTACTGAGATCCTGGACTTTGAAATGAATGATTCATATGTGTGGGTTGATACAGAGCTGCAGTTAAAGGAACTGGTCAATGTATTAAGCAGTGAGAAATTCTTTGCCGTGGACACAGAACAACATAGCTTAAGATCTTTTCTGGGCTTTACATCATTAGTTCAGATTTCTACACTGAAGAAAGATTATTTGGTTGACACAATTGCCCTGCATGATTTTATGGGGATTCTTCGACCAGTTTTTGCCAGTCCTTCAATTTGTAAAGTGTTCCATGGAGCTGACAATGATGTTGTGTGGCTACAGAGGGACTTCCATATATATGTCGTTAACTTGTTTGATACTTCAAAGGCATGCGAGGTGCTGTTAAAACCACAGAAGTCACTTGCTTATTTACTGGAAACTTACTGCAGTGTGTCAACAAATAAATTATTACAGCGTGAAGATTGGAGACAGCGACCCCTCTCAGCAGAAATGGTTCAATATGCACGAACAGATGCTCACTATTTGTTGTATATTGCAAACTGTTTGATCAGTGAGCTCAGACAACTGGATAATGAAATCTCTTGTGCCGATGACAAATTCCATTTTGTTCTCGAGGCTAGTCGGCGTTCAAACATAAGTTGTTTGCAACTTTTCACAAAAGAGGTCGAAGCTTCTCCTGGTGAATCTGCTGCATTATCATTATTTTCTCGTCATGTAAGCAGTCAAGGTTTTTCTTCAGCTTCTGATGAAACTAAGTTTCAGAATATTATGAGGCAGTTGTGCGCATGGAGAGATATGATGGCTCGCATTCATGATGAGAGCTTAAAATATGTGCTGTCTGACCAGGCAATTGTTGCTTTGGCAAGTCAGCCTTCAGCGAGTCAATCTGAAATATACAATATCATAGCTCAGGCTGATAACAATGGGGAAATTGGTCTGAATTCTTTCATTACTTCCCCATCTTCTGTTGTTTGCAGCCACCTGAGTGATATCCATCATCTGCTTGCTGCCAATTTGGTTAACCATGGTGATATTTATTCAGCAATTCTTCAGAAGTGCCTAGGTCCAAATGGGAGTTGTCCACTTTCTATATTTAATTATCTTTTGCTGGTTAACAGTAACCTGAAACCAACTTTATCCTATAAACCCTCTGGTCAAAAAAATCCTAGGCAATATTCCCGGAAGGCTTCTCGAGATTTGTTTGTTAAAAAATTCTCGTGTAAATCTCCTGTTTATCATAATTGCCGGATATTTGCTAGTGATGGGAGGCTTCTCTGTTATTGTGATAAGAAGAAGCTTGAATGGTACCTTAGTCGGGATCTGGCAAAACTTGTTGATGAGGACCCACCAGCTATAATGCTTCTTTTCGAACCCAAAGGCCGCCCAGAGGATGAAGACAATGATTTTTATATCCAGAGTAAGAAAAATATATGTGTTGGGTGTGGTGAAGGAAATCACTACTTACGGTATCGAATAATCCCATCATGTTACAGAGTGCATTTCCCTGAGCATTTGAAAAGCCATCGTTCTCATGACATTGTCCTACTTTGTGTGGACTGTCATGAAGTTGCCCATGCTGCTGCGGAGAAGTATAAGAGAAAAATAGCTGCTGAATTTGGGATTCCTCTGTATGTTCGTAAGGTAATTCATCCCGTACAACAGACTGAGGTACAGATCGAGGGAGGCGTATCTCCATTAGAGTTACGAATAGCTGCTATGGCTCTTTTACGCCATGGACCAAGAATGCCTCAGAATCGCCGTAAAGAATTGACTGAGATTGTAAAGAGATATTATGGAGGAAGAGAGATATCTGAGGAAGATCTAGAAAGAGCTTTGGTAGTTGGTATGAGTCCTCATGAGCGAAGACGGTTTGAAAAGAAGAGAGGTTTTTCTCTCAGACATATAGGGATTACTACTGCAGGGTCAGCACAAGAAAATCATGCTGATTCTAGAACAGGTGACGTGGACATATCAAAAACCGATTCTCTTGACGATTCACATTTAATTGAGGAAACTAGAAGTGAAGAAGATAAAGAACTTTCGATGGTAAAAGATGATTTAGGAAACCCCTGTATAGCTTCTGATCTTGCAGTTGATGGAGCTGTCTCTGCTACTACGGTTAAAACTGTGGATTATAATGCAAGCAGTGACTCTACTGCAAATGTTGATGATGGCTGTCTGAGCAGAAAACAACCAAATGGAAATAGTGAATTATCTTATACCCCGAAAGATGAAGAGTTGACACAAACCAAACATAATTCAAAACTATCACTCTTGGGACATGGACCACATGGGCAACAAGTTGTAGAACATATAATGAAGGAATATGGTGAAGATGGTATTGGGCAGTTTTGTCAACGATGGAGGCAAGTATTTGTGGAAGCTGTAAATCCGCGCTTTCTTCCCGCTGGTTGGGATGTAAAACACAGTGGAAGAAGGGACTTCGGCGAGTATAGTGTATACAATCCTGGCAGGAGAATGGTTGATGATGATAGCACTCAGTGA 2805 0.4071 MNNVQKMRIAFTIATVATICIFLTARNRRRRRNRHNSHSTSCYLHSEAKPQSVFKRVLADNSYTPFKHLKKLSDSSSSSDENASNAHPFESEIMELLKNPLPEIEVSTEILDFEMNDSYVWVDTELQLKELVNVLSSEKFFAVDTEQHSLRSFLGFTSLVQISTLKKDYLVDTIALHDFMGILRPVFASPSICKVFHGADNDVVWLQRDFHIYVVNLFDTSKACEVLLKPQKSLAYLLETYCSVSTNKLLQREDWRQRPLSAEMVQYARTDAHYLLYIANCLISELRQLDNEISCADDKFHFVLEASRRSNISCLQLFTKEVEASPGESAALSLFSRHVSSQGFSSASDETKFQNIMRQLCAWRDMMARIHDESLKYVLSDQAIVALASQPSASQSEIYNIIAQADNNGEIGLNSFITSPSSVVCSHLSDIHHLLAANLVNHGDIYSAILQKCLGPNGSCPLSIFNYLLLVNSNLKPTLSYKPSGQKNPRQYSRKASRDLFVKKFSCKSPVYHNCRIFASDGRLLCYCDKKKLEWYLSRDLAKLVDEDPPAIMLLFEPKGRPEDEDNDFYIQSKKNICVGCGEGNHYLRYRIIPSCYRVHFPEHLKSHRSHDIVLLCVDCHEVAHAAAEKYKRKIAAEFGIPLYVRKVIHPVQQTEVQIEGGVSPLELRIAAMALLRHGPRMPQNRRKELTEIVKRYYGGREISEEDLERALVVGMSPHERRRFEKKRGFSLRHIGITTAGSAQENHADSRTGDVDISKTDSLDDSHLIEETRSEEDKELSMVKDDLGNPCIASDLAVDGAVSATTVKTVDYNASSDSTANVDDGCLSRKQPNGNSELSYTPKDEELTQTKHNSKLSLLGHGPHGQQVVEHIMKEYGEDGIGQFCQRWRQVFVEAVNPRFLPAGWDVKHSGRRDFGEYSVYNPGRRMVDDDSTQ* 935
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g2730 934 PANTHER POLYMYOSITIS/SCLERODERMA AUTOANTIGEN-RELATED 2 926 IPR045092 GO:0000175|GO:0000467
Aev04g2730 934 MobiDBLite consensus disorder prediction 741 760 - -
Aev04g2730 934 Gene3D HRDC domain 342 444 IPR044876 -
Aev04g2730 934 MobiDBLite consensus disorder prediction 815 845 - -
Aev04g2730 934 Coils Coil 279 299 - -
Aev04g2730 934 MobiDBLite consensus disorder prediction 815 843 - -
Aev04g2730 934 Pfam 3'-5' exonuclease 119 286 IPR002562 GO:0003676|GO:0006139|GO:0008408
Aev04g2730 934 PANTHER PROTEIN RRP6-LIKE 3 2 926 - -
Aev04g2730 934 SMART 35exoneu6 119 287 IPR002562 GO:0003676|GO:0006139|GO:0008408
Aev04g2730 934 Pfam HRDC domain 354 401 IPR002121 GO:0003676
Aev04g2730 934 Gene3D - 48 323 IPR036397 GO:0003676
Aev04g2730 934 SUPERFAMILY Ribonuclease H-like 49 290 IPR012337 -
Aev04g2730 934 ProSiteProfiles HRDC domain profile. 350 430 IPR002121 GO:0003676
Aev04g2730 934 SUPERFAMILY HRDC-like 353 403 IPR010997 GO:0000166|GO:0044237
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g2730 Aev-Chr4 27086569 27094906 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g2730 K12951 - gmx:100791485 1394.41
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev04g2730 04 27086569 27094906 Aev04g2730 04 27086569 27094906 ECH