Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g2724 ATGAGTTCCCCTTCAGTGACTAACCATCATGGTATTAATCATCAACCTTTGTTAGAACCATCTAATTTATCATTCAGTTCAAAGTACCATGAATCAAGTGGTGAGCTAGAGAGAATACTGTCAGATACAAGTGTTCCCTTCATAAGGAGACTTGGACCAGCAATATGGATTGAGTTGAAGTTGCTTCTGTACCTTGCTGCACCAGCAGTAATAGTTTATCTGATAAACTATGTGATGTCTATGTCAACACAAATCTTCTCTGGACACCTTGGTAATCTTGAGCTTGCTGCTGCTTCCCTTGGAAACACTGGCATCCAAGTCTTTGCTTATGGCCTCATGTTGGGTATGGGAAGTGCTGTTGAGACACTATGTGGACAAGCATATGGAGCACAAAAGTTTGAAATGCTAGGAATATACTTGCAAAGATCAACAATTCTCCTAACACTAGCAGGTGTAATCTTAACTTTAATATATGTCTTCTCTGAACCAATCTTGATCTTTCTAGGTGAATCCCCAAAAATTGCATCAGCAGCAGCACTTTTTGTCTATGGACTGATCCCTCAAATCTTTGCCTATGCTATGAACTTCCCAATTCAAAAATTCCTCCAAGCACAGAGCATAGTGGCTCCAAGTGCATACATATCAACAGCAACACTAGTAGTTCATCTTTTGCTAAGTTGGTTAGTTGTGTACAAAATTGGATTAGGATTATTGGGGGCATCATTGGTTCTGAGCTTTTCATGGTGGATTATTGTGATTGCACAGTTTGTGTATATAGTGAAAAGTGACAAGTGTAGGAATACTTGGAGAGGGTTCAGTGGTCAAGCATTTTCAGGGTTACCAGAATTTTTCAAGCTTTCTGCTGCATCAGCAGTTATGTTGTGCCTCGAGACATGGTACTTTCAAATTCTGGTTTTGCTTGCAGGCTTGTTACCTCACCCTGAATTGGCTCTGGATTCCCTTTCTATTTGTACCACAGTGTCTGGATGGGTGTTCATGATCTCAGTTGGATTTAACGCTGCTGCAAGCGTGAGAGTGAGCAACGAGTTAGGAGGAAGAAACCCAAAATCAGCGTCATTCTCAGTGTTGGTGGTGACAGTGATTTCATTCATAATATCGGTGATTGTAGCAATTGTGGTGCTTGCGTTGCGTGACGTCATCAGCTATGTGTTCACAGAAGGTGAAGAGGTTGCTGCTGCTGTCTCTCATCTCTGCCCACTCCTCGCCCTTTCCATTCTCCTCAACGGCATTCAGCCTGTCCTTTCTGGGGTGGCCGTTGGATGTGGATGGCAAACTTTTGTTGCGTATGTGAACGTTGGCTGCTACTATGGAATTGGCATACCATTGGGTTCTCTTCTCGGTTTCTATTTCCATTTCGGTGCTAAGGGAATATGGATTGGAATGCTAGGTGGAACGGTTTTGCAAACAATTATTTTAATGTGGGTGACATTTCGAACGGATTGGAATAGAGAGGTTGAAGAAGCATCTAAGAGGTTGAACAAGTGGGAGGACAAGACGGAACCTTTGCTCAAGAACTGA 1539 0.425 MSSPSVTNHHGINHQPLLEPSNLSFSSKYHESSGELERILSDTSVPFIRRLGPAIWIELKLLLYLAAPAVIVYLINYVMSMSTQIFSGHLGNLELAAASLGNTGIQVFAYGLMLGMGSAVETLCGQAYGAQKFEMLGIYLQRSTILLTLAGVILTLIYVFSEPILIFLGESPKIASAAALFVYGLIPQIFAYAMNFPIQKFLQAQSIVAPSAYISTATLVVHLLLSWLVVYKIGLGLLGASLVLSFSWWIIVIAQFVYIVKSDKCRNTWRGFSGQAFSGLPEFFKLSAASAVMLCLETWYFQILVLLAGLLPHPELALDSLSICTTVSGWVFMISVGFNAAASVRVSNELGGRNPKSASFSVLVVTVISFIISVIVAIVVLALRDVISYVFTEGEEVAAAVSHLCPLLALSILLNGIQPVLSGVAVGCGWQTFVAYVNVGCYYGIGIPLGSLLGFYFHFGAKGIWIGMLGGTVLQTIILMWVTFRTDWNREVEEASKRLNKWEDKTEPLLKN* 513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g2724 512 CDD MATE_eukaryotic 58 494 IPR045069 GO:0042910|GO:1990961
Aev04g2724 512 PANTHER PROTEIN DETOXIFICATION 18 499 - -
Aev04g2724 512 TIGRFAM matE: MATE efflux family protein 68 465 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Aev04g2724 512 Coils Coil 485 505 - -
Aev04g2724 512 Pfam MatE 68 228 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Aev04g2724 512 Pfam MatE 290 450 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Aev04g2724 512 PANTHER MULTIDRUG RESISTANCE PROTEIN 18 499 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g2724 Aev-Chr4 27021148 27028596 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g2724 K03327 - gmx:100801718 831.632
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev10g2084 10 21652997 21656926 Aev04g2724 04 27021148 27028596 PCT