Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g2673 ATGGAAACACGATTGTCAAAGCGCAAAAAGATCGCTTTGATAATAGAAAACGACGCAAAATCCGCCATCGATAGGATCAGTGATCTCCCCGATGCAGTTCTTCACGACATTCTTCTCCTCCTTCCGATCAAAATCGTTGCCCAAATGAGTGTTCTTTCAAAAAGATGGAAGTTTCTTTGGACAACATTTCCCGACCTTGATTTCACAACCCTTAACCCTTTCTCCATCTCTTCCAACAAAAACAGATTCAGAGTCACAACTCTTAACAACAACCCATTAGCCTCAACAAGCATGGATTTCATCACACAAGTTCTCTCAATCCGAGACAAAAACTCTGACATTCGAATCCTCTATTTTCGTGCTCGATTAAGCTTCTCGAGGCTTAACACCTTGATCCGAAGCGCAATTAGGCACAATGTTAGAGAGCTTGATATTGAAGTGGCCACAGAAGTTGTAACTGATGATTACTTCAACTTCCCAAGATGTGTAATTGCGAGTGATTCCTTAAGGGTCTTGAAATTGAAGTCGGGTTTTCGGTTACCACCATCATCAATTATGAGGGACGGTTTCCAATCTCTTCAAACACTGTCTCTTTCACTAGTAATTTTGTACAGTCAGCCCTTTCTCTCTGATTTGTTCTGTGAATCATCATTTCCTCTGTTGAAAAATTTGCACCTTGACATGTGCTTTGGGTTGAAGTACCTACATGTTGGGTGCAAGGGACTAGAAGATTTTAGCTTAGAGAAGTGTTTTCAACTACAAGGATTGGATGTGTCATGTGTGAAGCTAGAGAGGATGAAGGTGACAAGTTGTTTTGATGCGTATAGTGAAAAGAGTTGGGTGAGGATTAATGCACCGAAGCTTGGGCATTTGTGTTGGCAATATAATGCAGTTACTGATATGACTATTTTTGAGCATTCCAATTTGTTGGGTGAAGCTTCCATTGGTTTCTTCGTGCCTATTGAGGATCTTAGTATTGCTAAGGTTCAGAGTGTCAATAGTTTCTTGTCTGGCTTGTCTCATGCTCAATCCTTGACTCTTGAAACCCAAACCATTGAGGTTCTATCAAACAATAACTTCTTTATTCAACCATTTCATAATCTTAAGATATTAGAATTGCACACTGGCTTCAACAAAAGTAATGTTCAAGGATTAGCATGCCTTTTCAGGAGCTCTCCTGCAGTCCACACGCTGATTCTGAAGATCATTAATGATTATAAGATTGAAAGAAAACAATGGAATAGGGACTTGTGGGATATGACTAGCACAGAGGAAGAGCAGTATTGGGAATCTCAGATCCCAAATCTCAAGTTCTTTTTGCAACACTTAAAAGTGGTGAAAATCCATGGGTTTCTTGATTGTGAGAATGAAGTTACACTTGCAAAGTTTCTCCTCAAGCATGGGAAGGCCTTGGAAGAAATGATACTATGCGCGGGACATTGCAATGCTAGAGATACTCTTAGACGACAGAAAATAAGGTCACAAATGATGGGATTTTCTTGGGCTTCTTCTAATGCAAAAGTGGCATTTCAATAA 1536 0.3991 METRLSKRKKIALIIENDAKSAIDRISDLPDAVLHDILLLLPIKIVAQMSVLSKRWKFLWTTFPDLDFTTLNPFSISSNKNRFRVTTLNNNPLASTSMDFITQVLSIRDKNSDIRILYFRARLSFSRLNTLIRSAIRHNVRELDIEVATEVVTDDYFNFPRCVIASDSLRVLKLKSGFRLPPSSIMRDGFQSLQTLSLSLVILYSQPFLSDLFCESSFPLLKNLHLDMCFGLKYLHVGCKGLEDFSLEKCFQLQGLDVSCVKLERMKVTSCFDAYSEKSWVRINAPKLGHLCWQYNAVTDMTIFEHSNLLGEASIGFFVPIEDLSIAKVQSVNSFLSGLSHAQSLTLETQTIEVLSNNNFFIQPFHNLKILELHTGFNKSNVQGLACLFRSSPAVHTLILKIINDYKIERKQWNRDLWDMTSTEEEQYWESQIPNLKFFLQHLKVVKIHGFLDCENEVTLAKFLLKHGKALEEMILCAGHCNARDTLRRQKIRSQMMGFSWASSNAKVAFQ* 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g2673 511 SUPERFAMILY RNI-like 167 400 - -
Aev04g2673 511 Pfam F-box domain 26 61 IPR001810 GO:0005515
Aev04g2673 511 Pfam FBD 439 476 IPR006566 -
Aev04g2673 511 PANTHER F-BOX/RNI/FBD-LIKE DOMAIN PROTEIN 22 456 - -
Aev04g2673 511 Gene3D Ribonuclease Inhibitor 21 303 IPR032675 -
Aev04g2673 511 ProSiteProfiles F-box domain profile. 23 71 IPR001810 GO:0005515
Aev04g2673 511 SUPERFAMILY F-box domain 21 77 IPR036047 GO:0005515
Aev04g2673 511 SMART 9598neu4hmm 437 511 IPR006566 -
Aev04g2673 511 PANTHER F-BOX PROTEIN-LIKE 22 456 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g2673 Aev-Chr4 26521727 26525540 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev04g2673 5 416 EF-hand Containing Proteins AT5G41840 22.991 3.74e-10 60.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g2673 - - ahf:114927451 832.787