Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g2667 ATGGCTGGAGTTGCATTTGAAGACTTGCTTCCAGTGATGGCTAACAAGCTAGGAGGGGAAGGCCTTGTAAAGGAACTGTGCAATGGGTTCCAATTGTTGATGGACAAGGAAAAGGGTGTGATTACTTTGGAGAGCTTAAGGCAAAACGCTGCCGTTTTGGGGTTGCAGGACATGAAGGAGGATGAGCTTGTGAGCATGATGAGGGAAGGGGACATTGATGGCGATGGTGCACTCACCCAGATGGAGTTCTGTGTTTTGATGTTCAGATTGAGCCCTGACTTGATGGAAGACTCTTGGTTTTGGATTGAAGAAGCACTCCAATGTGAACTCAACAACAACAAATCTTCTACTTAG 354 0.4633 MAGVAFEDLLPVMANKLGGEGLVKELCNGFQLLMDKEKGVITLESLRQNAAVLGLQDMKEDELVSMMREGDIDGDGALTQMEFCVLMFRLSPDLMEDSWFWIEEALQCELNNNKSST* 118
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g2667 117 SUPERFAMILY EF-hand 22 99 IPR011992 -
Aev04g2667 117 Pfam EF-hand domain pair 37 89 IPR002048 GO:0005509
Aev04g2667 117 SMART efh_1 62 90 IPR002048 GO:0005509
Aev04g2667 117 ProSitePatterns EF-hand calcium-binding domain. 71 83 IPR018247 -
Aev04g2667 117 Gene3D - 4 117 - -
Aev04g2667 117 PANTHER CALCIUM-BINDING EF-HAND PROTEIN 3 115 - -
Aev04g2667 117 ProSiteProfiles EF-hand calcium-binding domain profile. 58 93 IPR002048 GO:0005509
Aev04g2667 117 PANTHER CALCIUM-BINDING PROTEIN KIC 3 115 IPR044205 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g2667 Aev-Chr4 26455067 26455420 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev04g2667 6 110 EF-hand Containing Proteins AT4G27280 65.094 5.05e-44 138
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g2667 K24345 - gmx:100527206 214.542
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev04g2667 04 26455067 26455420 Aev04g2667 04 26455067 26455420 ECH