Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g2597 ATGGTGGCTGGAAATGGTTTGTTTTACCCCATTTTCGGTTTTGCATCATTGGTGCTTTTCATGTACATGTCTTTTGGGGACCTAAGATTTGGTTTTGATGAAGGGCCAGAATTGTCCTTTGTGGGTAGGAATGGTTCACAGTTTGTAGTTGATGGAAAAAATTTCTACATTAATGGATGGAATTCTTACTGGTTGATGGTGCAATCTGTTGATGATTATTCAAGGCCTAGGGTTCGTGAGATGCTGAGAGCTGGGGCCAAGATGGGTCTCACTGTTTGCCGAACTTGGGCATTCAATGATGGTGACTACAATGCCCTTCAGACTTACCCTGGTGTCTTCAATGAACAAGCTTTCAAAGCATTGGACTATGTTATAGCAGAAGCAAGGCAACATGGAATTAGGCTGCTTCTTAGCTTAGTGAATAACTTGCATGCATATGGTGGGAAGACTCAGTATGTCAAATGGGCATGGCAAGAAGGGGTCGGATTAAGCTCATCTAATGATTCTTTCTTCTATGATCCATCAATCCGTAGTTATTTCAAGAATTACATAAAGACTATTCTCACGAGGAAAAATACTATTACCGGAATTGAATATAGGAATGACCCCATCATTTTTGGCTGGGAATTAATTAATGAACCTCGGTGCATGACTGATCCTTCTGGTGACACTCTCCAAGATTGGATAGAAGAAATGTCAACTTTTGTCAAATTGATCGACAAGAACCATCTGGTTACTGTTGGGCTTGAAGGCTTTTACGGACCTAATGATCCAAAGCGTTTGACTGTCAACCCTGAGGACTGGGCATCGAGACTTGGATCTGATTTTATTAGGAACTCCAAAATCTCAAATATCGATTTCACCTCGGTTCATATCTATCCTGACCATTGGTTTAAAGAGGAAGTTTTTGAAGACTACATGAAATTTGTCTCAAAGTGGATGCTTTCTCACATTGAAGATGGCGACAAGGTATTGAACAAGCCGGTCTTGTTCTCTGAATACGGATTATCGGACACGATCAAGAACTTTTCGCTGTCTGAACGAGAAACGATGTATAGAGCAATTCTAGACATAACCTACAAATCAGCTAAGAAAATGAGATCAGGAGCAGGTGCTTTAGTTTGGCAATTCTTAGTTGGAGGAATGAACGAGTTCCAAGATGATTTTTGGATTGTTCCATGGGAGAGGTCGTCAACCTATTCACTATTCATTGAACAATCATGCAGATTAGCCAAAGTCAATGGATGGACTCCAAGGGAAACAATTCTCAAACAAATTTGTTAG 1284 0.405 MVAGNGLFYPIFGFASLVLFMYMSFGDLRFGFDEGPELSFVGRNGSQFVVDGKNFYINGWNSYWLMVQSVDDYSRPRVREMLRAGAKMGLTVCRTWAFNDGDYNALQTYPGVFNEQAFKALDYVIAEARQHGIRLLLSLVNNLHAYGGKTQYVKWAWQEGVGLSSSNDSFFYDPSIRSYFKNYIKTILTRKNTITGIEYRNDPIIFGWELINEPRCMTDPSGDTLQDWIEEMSTFVKLIDKNHLVTVGLEGFYGPNDPKRLTVNPEDWASRLGSDFIRNSKISNIDFTSVHIYPDHWFKEEVFEDYMKFVSKWMLSHIEDGDKVLNKPVLFSEYGLSDTIKNFSLSERETMYRAILDITYKSAKKMRSGAGALVWQFLVGGMNEFQDDFWIVPWERSSTYSLFIEQSCRLAKVNGWTPRETILKQIC* 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g2597 427 Gene3D Glycosidases 37 414 - -
Aev04g2597 427 PANTHER GLYCOSIDE HYDROLASE FAMILY 5 PROTEIN 4 427 - -
Aev04g2597 427 PANTHER - 4 427 IPR045053 GO:0004553
Aev04g2597 427 Pfam Cellulase (glycosyl hydrolase family 5) 58 375 IPR001547 GO:0004553|GO:0071704
Aev04g2597 427 SUPERFAMILY (Trans)glycosidases 39 403 IPR017853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g2597 Aev-Chr4 25689136 25693560 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev04g2597 3 415 Glycoside Hydrolase AT2G20680 70.460 0.0 622
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g2597 K19355 - gmx:100811461 781.941
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev04g2597 04 25689136 25693560 Aev04g2597 04 25689136 25693560 ECH