Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g2560 ATGCCACTACAGCAGCACCAACCAACTTCAATGGAACCAATCCTGAGCTATAACACCAGCAATGGCAATGGCCATAGCTATGGCTATGGCAACGGAATCAGAAGCAGAAGCAGTGAAAGTAAAGAGCATGATGTGATTGGTTGGTTTGAGGATGTGTCTCAGAACGCTTCCTCTGTTCAGACTCAGATTTTATGCCAGATTCTGAAACAGAACTATGGAGTGGAATATCTGAAAAACTGGTTGGGGGAATACAACAATAATATCCTCGAGATGGATTCTTGTGCATTGGAATCCCTTTACACCTCTCTTGTTCCTCTTGCCTCTCATGCAGATTTTGAGCCTTTTATTCAAAGGATTGCAGATGGGGACACAACCCCTTTACTCACTCAACAACCCATAACCACTCTTTCCTTAAGTTCTGGAACCACAGAAGGAAGGCAGAAATTCGTACCCTTTACCCGCCACAGTGCACAAACTACCCTTCAAATTTTCACTTTAGCAGCAGCCTATAGATCAAGGGTTTATCCCATAAGGGAAGGAGGAATGATCCTTGAATTCATATACAGCAGCAACAGATTCAAAACAAAAGGAGGATTAACAGTAGGAACAGCAACAACACACTACTATGCAAGTGAGGAGTTCAAGATCAAGCAAGAAAAAACAAAATCATTCACTTGCAGCCCAGATGAGGTTATTTCTGGTGGAGACTACAAGCAATCAACATATTGTCATCTCCTCCTTGGCCTATTCTTCTCTGACCAAGTAGAGTTCATAACCTCTGCTTTTGTATACAGTATGGTCCAAGCATACAGAACTTTTGAGGAGCTGTGGAGAGAGATATGCAATGACATAAGATTTGGAACACTTAGCACAAGAATCAAGTTGCCCAAAATGAGAAGGGCAGTTTTGGAAATAATCACTCCAAACCCATGTTTGGCTTCAAAATTGGAAGGTGTTTGCAAGGATCTGGAATTGGTGGATTGGTTTGGTTTGATTCCAATGCTTTGGCCAAATGCCAAATATGTTTATTCCATAATGACAGGGTCTATGGAACCTTATGTGAAGAAACTAAGGCATTATGCAAATGGGTTACCTTTGGTTAGTGCTGATTATGGTTCTACTGAGAGCTGGATTGGGGTTAATGTGGATCCAAGTTTTCCACCAGAGAAAGTAACATTTACTGTTGTGCCTACTTTCTCTTACTTTGAGTTTATACCACTATATAGACATAAACAAGATTGCGGTTCAGTTTGTGATGATTTCATTGAAGATAAGCCTATTCCACTATCCCAGGTTCAAGTTGGACAAGAGTATGAAATTGTCCTCACAACTTTCACAGGACTGTACAGGTGCAGATTAGGAGACGTAGTGGAAGTGGCAGGTTTTCACAACGGGACCCCAAAATTAAACTTCATATGCAGAAGAAAACTAATCCTGACAGTGAATATTGACAAGAACACAGAGAAGGACCTACAGCTAGTGGTAGAAAAAGCGTGTTCGCTACTTACGAATAAGGCCAAAGCAGAGCTGGTCGATTTCACGAGCTACGCCAACGTCACCAACGACCCTGGTAACTACGTGATCTACTGGGAGATAAATGGCGACGATGTAGAGGATGCCTTGCTCGACGCGTGTTGCACCGAAATGGACGCATCGTTCGCTGATCATGGCTACGTGGTGTCGAGGAAGACCAATTCGATAGGGCCCCTTGAGCTGTGCGTTGTGGAGAGAGGCACTTTTAGGAAGATTTTGGATAACTCGATTTCCAATGGGGCAGCGTCTTTGAGCCAGTTCAAGACCCCTAGGTGCACTAACAATAGTGTCATCCTCAACATTCTTAGCGCATGCACTGTTAAAAAGTTTCGTAGCAGTGCTTATAGTAATAATAATGATAAGTATAATAATAATAATGGCTCTCATCGGGTCAACCATGATATTGTGAAATAA 1947 0.4232 MPLQQHQPTSMEPILSYNTSNGNGHSYGYGNGIRSRSSESKEHDVIGWFEDVSQNASSVQTQILCQILKQNYGVEYLKNWLGEYNNNILEMDSCALESLYTSLVPLASHADFEPFIQRIADGDTTPLLTQQPITTLSLSSGTTEGRQKFVPFTRHSAQTTLQIFTLAAAYRSRVYPIREGGMILEFIYSSNRFKTKGGLTVGTATTHYYASEEFKIKQEKTKSFTCSPDEVISGGDYKQSTYCHLLLGLFFSDQVEFITSAFVYSMVQAYRTFEELWREICNDIRFGTLSTRIKLPKMRRAVLEIITPNPCLASKLEGVCKDLELVDWFGLIPMLWPNAKYVYSIMTGSMEPYVKKLRHYANGLPLVSADYGSTESWIGVNVDPSFPPEKVTFTVVPTFSYFEFIPLYRHKQDCGSVCDDFIEDKPIPLSQVQVGQEYEIVLTTFTGLYRCRLGDVVEVAGFHNGTPKLNFICRRKLILTVNIDKNTEKDLQLVVEKACSLLTNKAKAELVDFTSYANVTNDPGNYVIYWEINGDDVEDALLDACCTEMDASFADHGYVVSRKTNSIGPLELCVVERGTFRKILDNSISNGAASLSQFKTPRCTNNSVILNILSACTVKKFRSSAYSNNNDKYNNNNGSHRVNHDIVK* 649
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g2560 648 Pfam GH3 auxin-responsive promoter 48 606 IPR004993 -
Aev04g2560 648 PANTHER INDOLE-3-ACETIC ACID-AMIDO SYNTHETASE GH3.10 39 626 - -
Aev04g2560 648 PANTHER GH3 DOMAIN-CONTAINING PROTEIN 39 626 IPR004993 -
Aev04g2560 648 MobiDBLite consensus disorder prediction 629 648 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g2560 Aev-Chr4 25338369 25344882 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev04g2560 41 624 EF-hand Containing Proteins AT1G23160 35.452 2.53e-111 345
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g2560 K14487 - gmx:100813472 991.49
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev04g2560 04 25338369 25344882 Aev04g2560 04 25338369 25344882 ECH
Aev10g2001 10 21227144 21232207 Aev04g2560 04 25338369 25344882 PCT