Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g2544 ATGAGCCGTTACGACCCCAATCCCTTCGAGGAAGACGAGGTTAACCCCTTCGCAGATGGAACTAAAGGAAAAGGTTCAGGGCAATCAAGTTATGGTGGAGGTGCATTTTATACTACTAATCCTGGAAGTGTTCCCTCAGCAACTTCAAGGCTCTCACCCCTTCCTCCTGAGCCATATGATCGCGGGGCAACTGTTGACATTCCTCTTGATAGCTCAAAGGACGTCAAAGCAAAAGAGAAGGAACTTCAAGCTAGAGAGGCTGAGTTGAAAAGAAAGGAGCAGGAAATAAAACGAAGGGAAGATGCTATAGCACGAGCTGGGATAGTTATAGAAGAAAAAAATTGGCCACCTTTTTTTCCCATCATTCATCATGACATTGCAAACGAAATACCAGTACATCTTCAAAGGATCCAGTATATTGCATTTTCAACATGGTTGGGGTTAGTTTTGTGTCTTTTGTGGAACATTGTGGCAGTCACTACTGCTTGGATCAAAGGAGAAGGTCCAACAATCTGGTTTCTTGCTATTATCTACTTTATTTCCGGTGCTCCAGGATCCTATGTGCTGTGGTATCGGCCTCTTTACCGTGCAATGAGGACTGACAGTGCTCTGAAATTTGGCTGGTTTTTCTTGTGTTACCTGGTGCACATTGGCTTTTGCATTTTGGCTGCAGTGGCTCCACCAATTGTCTTCAAAGGAAAATCACTAACAGGTATTTTGGCTGCGATCGATGTGTTGGGCGACAATGCATTGGTGGGGATATTCTACTTTATTGGGTTTGGATTTTTCTGTCTCGAGTCACTGCTGAGCATCTGGGTTATTCAGCAAGTATACATGTACTTCCGCGGCAGTGGCAAGGCTGCAACGCTGAAGCGCGAGGCTGCTAGAGGAACAATGATGGCAGCTCTATGA 912 0.4518 MSRYDPNPFEEDEVNPFADGTKGKGSGQSSYGGGAFYTTNPGSVPSATSRLSPLPPEPYDRGATVDIPLDSSKDVKAKEKELQAREAELKRKEQEIKRREDAIARAGIVIEEKNWPPFFPIIHHDIANEIPVHLQRIQYIAFSTWLGLVLCLLWNIVAVTTAWIKGEGPTIWFLAIIYFISGAPGSYVLWYRPLYRAMRTDSALKFGWFFLCYLVHIGFCILAAVAPPIVFKGKSLTGILAAIDVLGDNALVGIFYFIGFGFFCLESLLSIWVIQQVYMYFRGSGKAATLKREAARGTMMAAL* 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g2544 303 MobiDBLite consensus disorder prediction 1 67 - -
Aev04g2544 303 MobiDBLite consensus disorder prediction 22 50 - -
Aev04g2544 303 Coils Coil 72 102 - -
Aev04g2544 303 PANTHER SECRETORY CARRIER-ASSOCIATED MEMBRANE PROTEIN SCAMP 1 303 IPR007273 GO:0015031|GO:0016021
Aev04g2544 303 Pfam SCAMP family 112 283 IPR007273 GO:0015031|GO:0016021
Aev04g2544 303 PANTHER SECRETORY CARRIER-ASSOCIATED MEMBRANE PROTEIN 1 303 - -
Aev04g2544 303 MobiDBLite consensus disorder prediction 1 18 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g2544 Aev-Chr4 25240453 25255121 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev04g2544 3 303 Miscellaneous Gene Families AT1G11180 67.638 1.33e-144 406
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g2544 K19995 - gmx:100796729 553.132
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev10g2005 10 21251112 21253387 Aev04g2544 04 25240453 25255121 PCT