Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g2541 ATGGATACCTACAACAACAATGGGGTTTCACTTGCCGACACAAACGGGTCGTGTTCCAGCCCGAATCCCACCATGAAGGAGGAGATATCATCGGAGCTTGAAAATCTTGAAACTTTGGGGTGCATCATTGAGGAAGGTGTAGAGAAAATCAGCTTATTGGGCGGCGGCGGCGGCGGTGCCTCTGAAACTTGTGAAACAAAAATCGAAGAAAATGGTCATAACCATGATGAGATTGAAGGTGAAGGCAAAGATAAAAGTGAATCAGAAAGTGAAAGTGAGAGTTCAGAGACTGAAAGTGCCACTTCATCTTCTTCGGGTTCGAGTTCTGGCGAAAGCAGTAGTGGTAGTGGTAGTGGTAGTGATAGTGATAGTGATGAGGATGATGATGATGAGGAGGAGGATGAGGAGGAGGAAGGGGATGGTGATGCACATAAGATGGTTAGTTGGAGCATGGTTGATGATGATGATATTGTTGATGGTGATGATGATGATGGTGTTGTTGGAGGAGGACCCATCAAGTCAAAGAATGAGCTTGAGGATCTGCCTTCAGTTCCCCCCGTTGATGTGACTTTAGAACCACACCATCAGATGCTGCCAGTGGGAGTTGTTATGTCGGTTCTCGGTGCTAGGGTGATTGTGGAAGGATTAGAGAAGCATGATCCTCTTAGTGAAGGTTCAATTCTCTGGATGACTGATAGCAGAAAACCACTAGGGTTTGTTGATGAAATCTTCGGACCAGTCAAAAACCCCTATTATGTTGTGAGGTACAACTCTGAAAATGAAGTCCCTACAGGGATCCTTGGAGGAACCTTGATCTCATTCGTCCCAGAATTTGCCAATCATGTGCTTAACAACAAGGATCTTTACAAGAAAGAAGCTTCAGTGAAAAAGCATTCGGCACCTACCATCCCTAATGCCCCTCCTGCACCTACCAATCATGGTGCACCTGCAGCACCACCGCCATTTGATCCAAATTCTTTATCTCTTCCAGGCATTGGACAGGGTCTTTTCCAAGGTGCTAATGCATTTCCACCATTCCCAATTCCACAACAAAATGCCAGCCCCAACTTCGCCACAAATGGAGTTTGGACAAACCCTACACTTCCCCAGCAACTGCAGTCTGCCCTACTTTCAAATGCATTTCCTACAAATGGCATACCTTGGTACCCACAAAATGCACAATTTTCGAATCAGTTGCCTTTGCCTGGAATTCCATTTCAGCATCAGTTAAATCCCAATCAAGGACCCATGCTGCCTGAGGTACAAGCCAATATACTTGCACAAGCCATGCTTGCACAGGGGCTTATGGCTCAAAACCAGATAACATTTGGATTGAACACAACCTTCCCCCAGATTCGGCCACAACAGGGTTTTCCATCCAGTGGATTTCAGCAGCCACCAGAAAGAAACCTTAATTTGAATTCTAGTACTGTTCCAGGTGCTGCCGCACCCCCTCAATTTCATCATGGTGCATCTGCTAGTAATGGGAGACAAACATTTCGTGGTGCTGGTAGGGGTAGGAAAGCATGGAGACCAGCTAAGTGA 1545 0.4608 MDTYNNNGVSLADTNGSCSSPNPTMKEEISSELENLETLGCIIEEGVEKISLLGGGGGGASETCETKIEENGHNHDEIEGEGKDKSESESESESSETESATSSSSGSSSGESSSGSGSGSDSDSDEDDDDEEEDEEEEGDGDAHKMVSWSMVDDDDIVDGDDDDGVVGGGPIKSKNELEDLPSVPPVDVTLEPHHQMLPVGVVMSVLGARVIVEGLEKHDPLSEGSILWMTDSRKPLGFVDEIFGPVKNPYYVVRYNSENEVPTGILGGTLISFVPEFANHVLNNKDLYKKEASVKKHSAPTIPNAPPAPTNHGAPAAPPPFDPNSLSLPGIGQGLFQGANAFPPFPIPQQNASPNFATNGVWTNPTLPQQLQSALLSNAFPTNGIPWYPQNAQFSNQLPLPGIPFQHQLNPNQGPMLPEVQANILAQAMLAQGLMAQNQITFGLNTTFPQIRPQQGFPSSGFQQPPERNLNLNSSTVPGAAAPPQFHHGASASNGRQTFRGAGRGRKAWRPAK* 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g2541 514 Gene3D Probable tRNA pseudouridine synthase domain 169 269 IPR038664 -
Aev04g2541 514 MobiDBLite consensus disorder prediction 121 140 - -
Aev04g2541 514 MobiDBLite consensus disorder prediction 95 120 - -
Aev04g2541 514 PANTHER H/ACA RIBONUCLEOPROTEIN COMPLEX NON-CORE SUBUNIT NAF1 13 291 - -
Aev04g2541 514 SUPERFAMILY Translation proteins 197 260 IPR009000 -
Aev04g2541 514 MobiDBLite consensus disorder prediction 1 28 - -
Aev04g2541 514 MobiDBLite consensus disorder prediction 452 514 - -
Aev04g2541 514 MobiDBLite consensus disorder prediction 294 324 - -
Aev04g2541 514 MobiDBLite consensus disorder prediction 66 92 - -
Aev04g2541 514 MobiDBLite consensus disorder prediction 51 183 - -
Aev04g2541 514 MobiDBLite consensus disorder prediction 303 324 - -
Aev04g2541 514 MobiDBLite consensus disorder prediction 452 481 - -
Aev04g2541 514 Pfam Gar1/Naf1 RNA binding region 198 261 IPR007504 GO:0001522|GO:0042254
Aev04g2541 514 PANTHER H/ACA RIBONUCLEOPROTEIN COMPLEX NON-CORE SUBUNIT NAF1 13 291 IPR040309 GO:0000493|GO:0003723|GO:0005732|GO:0042254
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g2541 K14763 - gmx:102660668 406.757
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev04g2541 04 25228692 25231841 Aev04g2541 04 25228692 25231841 ECH