Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g2425 ATGGAAAATGGCGGTGTGACCGTGAACTATGAATCCAAAGCAACTTCCACTATCACCATCAAGGGGATTTTAAGCCTTCTTATGCAGAGCGTTGATGAGAATCTTGATGGTGACAAGAGACTTATCTCTCTGGGAATGGGTGACCCAACCCTTCATTCATGCTTCCACACCACCAAGGTCTCTGAAGAAGCTGTAGCTGACACGCTTCAGTCTAACAAGTTTCATGGCTATGCTCCCACTGCTGGCCTTCTTCAGACCAGAAATGCAATCGCTGAATATCTGTCTCGTGACCTCCCTTATCAGTTATCATCAGATGATGTTTTTATCACTTGTGGATGCACACAAGCCATTGATGTTTCAGTGGCGATGCTTGCACGCCCTGGTGCGAATATCTTGCTTCCAAGACCAGGATTCCCAATCTACGAACTCTGTGCAGCATTTAGACAGGTTGAAGTGAGGCATTATGATCTGCTTCCTGAGAACGGCTGGGAGGTTGATCTGGATTCTATTGAAGCTCTTGCAGATCAGAACACAGTTGCTCTTGTGATTATAAACCCAGGGAATCCCTGTGGAAATGTGTACACCTATCATCATTTGGAAAGGATTGCAGAAACTGCAAAACGGCTAGGAACTATTGTGATTGCTGATGAAGTTTATGGTCATCTTGCATTTGGGGATAACCCATTTGTTCCAATGGGAGTTTTTGGTAATATAGTCCCTGTTCTCACTCTTGGGTCCCTGTCTAAGAGATGGTTAGTACCTGGATGGAGACTTGGCTGGTTTGTGACAAATGATCCCAATGGAAATTTTATTAAACCTAAGGTTGTGGAGCGCATTAAAAAGTATTTTGATATTCTGGGAGGCCCTGCCACCTTCATCCAGGCAGCTGTACCTCGCATAATTAAGCACACCGAGGAGGCTTTCTTCAAGAAAACAGTTGACAATTTGAGACATACCTCAAATATATGTTGCAAAGAGATAGAAGACATTCCCTGCATTTCTTGCCCTCATAAACCGCAAGGTTCCATGGCTATGATGGTGAAATTAAACCTTTCAGTTCTAGAAGATATTAGCGATGATATTGATTTTTGTTTCAAACTTGCAAAGGAGGAATCCGTTATCATTCTGCCAGGAACTGCAGTTGGGTTAAAAGATTGGCTTCGTATTACTTTTGCTGCTGATCCATCTGCCCTTGAAGAGGGTATGAAAAGGATAAAAGCTTTCTGTCAAAGGCATGCCAATGACACTCATAGTCTCCTCCAGAAGTCGTTATCTTCTCTTTATAGCTCCAAATAG 1296 0.4313 MENGGVTVNYESKATSTITIKGILSLLMQSVDENLDGDKRLISLGMGDPTLHSCFHTTKVSEEAVADTLQSNKFHGYAPTAGLLQTRNAIAEYLSRDLPYQLSSDDVFITCGCTQAIDVSVAMLARPGANILLPRPGFPIYELCAAFRQVEVRHYDLLPENGWEVDLDSIEALADQNTVALVIINPGNPCGNVYTYHHLERIAETAKRLGTIVIADEVYGHLAFGDNPFVPMGVFGNIVPVLTLGSLSKRWLVPGWRLGWFVTNDPNGNFIKPKVVERIKKYFDILGGPATFIQAAVPRIIKHTEEAFFKKTVDNLRHTSNICCKEIEDIPCISCPHKPQGSMAMMVKLNLSVLEDISDDIDFCFKLAKEESVIILPGTAVGLKDWLRITFAADPSALEEGMKRIKAFCQRHANDTHSLLQKSLSSLYSSK* 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g2425 431 Gene3D Aspartate Aminotransferase, domain 1 43 409 IPR015422 GO:0003824
Aev04g2425 431 PIRSF Tyr_transaminase 3 426 IPR005958 GO:0006520|GO:0008483|GO:0030170
Aev04g2425 431 Gene3D - 60 305 IPR015421 GO:0003824
Aev04g2425 431 ProSitePatterns Aminotransferases class-I pyridoxal-phosphate attachment site. 246 259 IPR004838 GO:0003824|GO:0009058|GO:0030170
Aev04g2425 431 SUPERFAMILY PLP-dependent transferases 35 412 IPR015424 -
Aev04g2425 431 PANTHER TYROSINE AMINOTRANSFERASE 9 414 - -
Aev04g2425 431 Pfam Aminotransferase class I and II 41 405 IPR004839 GO:0009058|GO:0030170
Aev04g2425 431 CDD AAT_like 42 407 - -
Aev04g2425 431 TIGRFAM tyr_nico_aTase: tyrosine/nicotianamine family aminotransferase 10 413 IPR005958 GO:0006520|GO:0008483|GO:0030170
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g2425 Aev-Chr4 23788627 23794047 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g2425 K00815 - gmx:732650 721.85
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev04g2425 04 23788627 23794047 Aev04g2425 04 23788627 23794047 ECH