Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g2400 ATGGCGATTCGCAACTCACTCTCCGGCCAACTCCTCCGTCGCAGCTCCGCCGGAGCCGGATCCAGATTCATATCGTCATGGTTCAAGAACATCGAGCAGGCTCCCAAGGACCCGATCCTCGGAGTTACCGAAGCTTTCCTTGCTGATCAAAGTCCAAACAAAGTCAATGTTGGAGTCGGTGCGTATCGTGATGACCACGGGAAGCCTGTGGTTCTTGAATGTGTTAGAGAAGCAGAGAGGAGGATTGCAGGAAGCCAATTCATGGAGTATCTTCCTATTGGTGGAAGCATAAAGATGGTGGAAGAATCACTGAAGCTGGCTTATGGAGAGAACTCTGAGTTCATCAAAGATAAAAGAATAGCTGCAGTGCAGGCTTTATCCGGTACTGGTGCATGTCGACTTTTTGCTGCATTTCAACAGCGTTTCCATCCTAACACCCAAATCTATATACCAGTGCCTACATGGGCCAACCACCATAACATTTGGAGAGATGCTGGAGTGCCTATGCAGACATTCCGTTACTATTACCCGGAGTCTAGAGGATTGGATTTTTCAGGACTGATGGAAGACATAAAGAATGCTCCAGATGGTTCATTCTTTCTGCTTCATGCTTGTGCTCACAATCCTACTGGAGTAGATCCTTCAGAAGAACAATGGCGAGAGATCTCTTCCCTTATAAAGGTTAAAGGTCATTTTCCTTTCTTTGACATGGCATATCAAGGTTTTGCTAGTGGTGATCCGGAGCGAGACGCAAAGGCTATTAGAATTTTTCTTGAGGATGGCCATTTAATTGGACTTGCACAGTCGTATGCAAAAAATATGGGACTGTATGGCCAGCGAGTAGGATGCCTTAGTTTGCTTTGTGAATATGAGAAACAAGCTGTGGCTGTAAAAAGTCAGTTGCAAAGAATTGCGAGACCAATGTATAGTAATCCACCACTTCATGGGGCGCTAATAGTTTCCACCGTCCTGGATGATCCAGAACTGAAAAAGTTGTGGCTTCAAGAAGTAAAGATTATGGCAGACCGGATAATTGGAATGCGAGCCACCCTACGACAGAACTTAGAAAAGTTGGGGTCTCCTTTGCCATGGCAGCACATAACCAATCAGATTGGCATGTTCTGCTATAGTGGGATGACTCCTGAACAGGTTGATCGTTTGACAAGCGAGTTTCATATTTACCTGACTCGTAATGGTCGTATAAGTATGGCCGGTCTTAATACGGGCAATGTTGGATATGTTGCTGAGGCCATCCATGAGGTCACAAAATCAGCCTAG 1278 0.4562 MAIRNSLSGQLLRRSSAGAGSRFISSWFKNIEQAPKDPILGVTEAFLADQSPNKVNVGVGAYRDDHGKPVVLECVREAERRIAGSQFMEYLPIGGSIKMVEESLKLAYGENSEFIKDKRIAAVQALSGTGACRLFAAFQQRFHPNTQIYIPVPTWANHHNIWRDAGVPMQTFRYYYPESRGLDFSGLMEDIKNAPDGSFFLLHACAHNPTGVDPSEEQWREISSLIKVKGHFPFFDMAYQGFASGDPERDAKAIRIFLEDGHLIGLAQSYAKNMGLYGQRVGCLSLLCEYEKQAVAVKSQLQRIARPMYSNPPLHGALIVSTVLDDPELKKLWLQEVKIMADRIIGMRATLRQNLEKLGSPLPWQHITNQIGMFCYSGMTPEQVDRLTSEFHIYLTRNGRISMAGLNTGNVGYVAEAIHEVTKSA* 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g2400 425 ProSitePatterns Aminotransferases class-I pyridoxal-phosphate attachment site. 269 282 IPR004838 GO:0003824|GO:0009058|GO:0030170
Aev04g2400 425 CDD AAT_like 55 420 - -
Aev04g2400 425 Gene3D - 85 326 IPR015421 GO:0003824
Aev04g2400 425 SUPERFAMILY PLP-dependent transferases 25 423 IPR015424 -
Aev04g2400 425 PRINTS Aspartate aminotransferase signature 200 219 IPR000796 GO:0006520|GO:0008483
Aev04g2400 425 PRINTS Aspartate aminotransferase signature 299 324 IPR000796 GO:0006520|GO:0008483
Aev04g2400 425 PRINTS Aspartate aminotransferase signature 367 385 IPR000796 GO:0006520|GO:0008483
Aev04g2400 425 PRINTS Aspartate aminotransferase signature 231 243 IPR000796 GO:0006520|GO:0008483
Aev04g2400 425 PANTHER ASPARTATE AMINOTRANSFERASE 1 424 IPR000796 GO:0006520|GO:0008483
Aev04g2400 425 Gene3D Aspartate Aminotransferase, domain 1 31 418 IPR015422 GO:0003824
Aev04g2400 425 Pfam Aminotransferase class I and II 53 418 IPR004839 GO:0009058|GO:0030170
Aev04g2400 425 PANTHER ASPARTATE AMINOTRANSFERASE, MITOCHONDRIAL 1 424 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g2400 Aev-Chr4 23293942 23300723 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g2400 K14455 - gmx:547813 788.875