Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g2397 ATGGCGGCACTGAAGCTCCTCATTTCCCAAGCGCGTCGCCATTGCGTTCCCTCAAACTTCCATTCTCCCATCTCCTTCACATCTCACAGAACCCTCTGTTCCACATCCTCATCACCACCACAAGAACACGATCGAGATCCCCAACAAAACCCTTCTCAAAGAAGACCCTTCCAATCCGTCCAAATCCAACCCGTTTCCTACCCTCTCAAGCCCAAAGACCCTTCTTCGCAAGAGACCGAACCCTCCGAACCACATTCCCTCCACCAACCGCCGCCTCCGCCTCCTCGCTGGCCTCCGAACCCGGAATCACGGCGGGGATTGACCAGGGAGGACCTACGGTATGTCAAGGATGGGTCGTCGATTGAGCCGGTGTCGTACCCCATTAGTGTAGCTCCGCTTCCGGACGATACTGTACCAACGGCGGCAGGGGGAGATGAAATGGACAAGGAAATGGATGAGGAGAGGAGGAGGATTGAGGTGCAGGATCAGATGAGGAGGAGGATGGAGAGGGCTGTCGAGGAGGAGAAGATGAAGGTGCCATTCCCGATGCTGATCATGCCCAAGCGTAACGAGAGGCCCCCTGTTGTTGATTTGGCCGAGGCGATTCGCAAAGTTAAGGCCAACGCTAATGCGAAGTTTGATGAAACAGTTGAAGCACATGTGAGATTGGGGGTTGATTCAAAGCGTACAGAACTGGCAGTTCGTGGTACTGTAATTCTGCCTCATGGTGCTCCAAAGGCTGTCAGTGTGGCTGTTTTTGCTGAAGGAGCAGAGGCAGAGGAAGCTAGAGCTGCAGGAGCTGATATAGTTGGTGGCAAAGAACTTATTGAGGAGATTGCTAGTGGTAGTAATAAGCTTAAAGTTGAAAAGTGCTTCTCAACTCCTGGAATGGCACCTCATCTTGGAAAGATAGCACAATATCTCAGAAAGCGCAGGCTGATGCCAGACAAGAAACTAGGTACTCTGACAAGTGATATTGCTGGCCAGTTGAAAGATCTAAGACGAGGACGGATTGAATTTAAAATGGAAAGTAAATCAATTTTGCATGTTGGATTAGGAAAGGTAAGTTACACAGAAGAGTCTCTACGGGAGAATATTGGTGCATTTATGAATGCTGTATTGCTTGCCAAGCCTGCTGGTTTAAAGAAGACTTCCAAATATGCTGGTTATGTGCTCTCTGTTCATATATGCAGCACGATGGGCCCCTCAGTTCCTGTTTCAATACAATCTTTATCCAAAGCAGCTGATAACTACAAGAAAGTGCATCTTTGA 1272 0.4914 MAALKLLISQARRHCVPSNFHSPISFTSHRTLCSTSSSPPQEHDRDPQQNPSQRRPFQSVQIQPVSYPLKPKDPSSQETEPSEPHSLHQPPPPPPRWPPNPESRRGLTREDLRYVKDGSSIEPVSYPISVAPLPDDTVPTAAGGDEMDKEMDEERRRIEVQDQMRRRMERAVEEEKMKVPFPMLIMPKRNERPPVVDLAEAIRKVKANANAKFDETVEAHVRLGVDSKRTELAVRGTVILPHGAPKAVSVAVFAEGAEAEEARAAGADIVGGKELIEEIASGSNKLKVEKCFSTPGMAPHLGKIAQYLRKRRLMPDKKLGTLTSDIAGQLKDLRRGRIEFKMESKSILHVGLGKVSYTEESLRENIGAFMNAVLLAKPAGLKKTSKYAGYVLSVHICSTMGPSVPVSIQSLSKAADNYKKVHL* 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g2397 423 Gene3D - 243 336 IPR016095 -
Aev04g2397 423 Pfam Ribosomal protein L1p/L10e family 206 402 IPR028364 -
Aev04g2397 423 MobiDBLite consensus disorder prediction 30 84 - -
Aev04g2397 423 MobiDBLite consensus disorder prediction 30 105 - -
Aev04g2397 423 CDD Ribosomal_L1 198 406 IPR028364 -
Aev04g2397 423 Gene3D - 198 406 - -
Aev04g2397 423 PANTHER 54S RIBOSOMAL PROTEIN L1, MITOCHONDRIAL 1 422 - -
Aev04g2397 423 MobiDBLite consensus disorder prediction 85 101 - -
Aev04g2397 423 Coils Coil 151 171 - -
Aev04g2397 423 SUPERFAMILY Ribosomal protein L1 189 407 IPR023674 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g2397 Aev-Chr4 23262272 23282434 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g2397 - - lang:109351870 548.51