Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g2360 ATGGCGAAACTGAAGATCGGAGGGACGTGGGCTGGCGTCCTGGTAGACGTCGACCTCGACGCGTGGACCGTACCCAAGCTTCGCGAAGAGGTGGCAAGGCGATCAAACTGCGTCGCCGATTCCATCAGCCTCATATGCGCCGGCAAGATTCTCAAGGACTCCCACGACGGAGACGGCGGAGCCAACCACCACAACTTGGCCCAATTAGGCGTCAAGAACAACTCTAAAATCCTCGCTACTCGTGTCTCCTCCGCTCAAGAAGGCAACTCCCTCAAACAAGAGATCATGGCCGAAGAAGAACGCTCTCGCAGGCTTTCCCGCGTCAGGGCAGCTGCAACTGCATTGGCTGAAAGGCATGCAGATGGTTCATTACCTGTTGAAGACTTCAACATAGAAGTTGAAGATCAAAGTGGAAAGAAAGTAAATCTAGGTTCTGAGACTGATCAGAGGGCAGTAATGATGGGACTGATGCTTCATGCAAAGGGGAAGCGTCTTATTAGACAGGGAAATTTCAAAGATGCGCTAGAAGTACTTAGCATGGGAGAGGAGGCATTCTCACTTTGTGATCCAAAAGTCATTGAGCTTATTGACAATGTTCCAATTCTGCAAATAGACATGGTCTGGTGCTACTTTATGATACGAGACATCAGATGGCTCTCGGATGCTGGAAAACGTCTTGAAAAGGCTAGGGCAGGAATTGAACGTGCTCATGGGAAGGATTCTTTCCGCCTCAGACTATTACAAGGTGGTCGCTATCCAGAACAAGCATTGCATTTGAGACTAGAGCTGTTGGAAGGGGTGGTGGCATATCATAGTGGCTTGTTGGAGAAATCAAGAAAAGCATTACTCTCTGCAAAAGCCAAATTTGTTCAGCTGCAAATCCCAGATGAAGCATTAACACTTGTCATGAGCATGGGCTACAAAGAACGCGATGCAAAGAGAGCATTGCGAATGAACAATCAAGATGTGGGGGGTGCCATCGATTTCCTTGTTGAGGAGGCTACAAAGAAAATGCAAAAACGAGAGGAAGACATCCGGAGAAGAAATGAAATTAAGGAGCAAAAGCGGTATGGGATGACACCCTTAAAGAAAGCTGTGGATCTAGGGATATTGAAGGAATTGGTCTCTATTGGGTTCGACAAGGAGCTTGCTGCCGAAGCCCTTAGAAGAAATGAAAATGATACTCAGAAGGCATTGGATGATTTGACAAATCTAGAAACTAATTCTGTTTTACAGGTTCACATTGAGTCAAGAAAAAGGAAGAGGAAGAAACAAGCAAAAGATTCTGCCATTGAAAAAGTTGTGAGCATGGGTTTTGAAAGATCAAGAGTGGTTGCTGCTTTTGAGGCCGGTGGCACTTTAGAACAAGTAATGGAAAGACTGACAGCGCAATCCGAGGTGGACCCCACGTCAACCGGCGCTCCTGATGGCAGTGCAAGTTCATCTGTCCCTTTACCACCAGAAAATGCTGTTTCTAATATTCTAGATGAGATGAATGATGCTGAAGGTCCATCAGATCTGAACAAGCCGGAAGAGCGCGATGTGGAGATGGAAGACGAGCTCTCTGCAGATATAGCGAAAGCAGATGCCTTAGCTGACTATGACATTGAGGTTAACATAGAAGGGGAAGCCATAAATGAGTACCTGGCTATGATAGAGGGAGCAGGCAGCAGTGGGAAAATGGTGCCTTCACAGTAG 1698 0.4688 MAKLKIGGTWAGVLVDVDLDAWTVPKLREEVARRSNCVADSISLICAGKILKDSHDGDGGANHHNLAQLGVKNNSKILATRVSSAQEGNSLKQEIMAEEERSRRLSRVRAAATALAERHADGSLPVEDFNIEVEDQSGKKVNLGSETDQRAVMMGLMLHAKGKRLIRQGNFKDALEVLSMGEEAFSLCDPKVIELIDNVPILQIDMVWCYFMIRDIRWLSDAGKRLEKARAGIERAHGKDSFRLRLLQGGRYPEQALHLRLELLEGVVAYHSGLLEKSRKALLSAKAKFVQLQIPDEALTLVMSMGYKERDAKRALRMNNQDVGGAIDFLVEEATKKMQKREEDIRRRNEIKEQKRYGMTPLKKAVDLGILKELVSIGFDKELAAEALRRNENDTQKALDDLTNLETNSVLQVHIESRKRKRKKQAKDSAIEKVVSMGFERSRVVAAFEAGGTLEQVMERLTAQSEVDPTSTGAPDGSASSSVPLPPENAVSNILDEMNDAEGPSDLNKPEERDVEMEDELSADIAKADALADYDIEVNIEGEAINEYLAMIEGAGSSGKMVPSQ* 566
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g2360 565 SUPERFAMILY Ubiquitin-like 13 79 IPR029071 -
Aev04g2360 565 ProSiteProfiles Ubiquitin-associated domain (UBA) profile. 425 450 IPR015940 -
Aev04g2360 565 Gene3D - 12 87 - -
Aev04g2360 565 SMART uba_6 427 463 IPR015940 -
Aev04g2360 565 SMART uba_6 295 332 IPR015940 -
Aev04g2360 565 SMART uba_6 367 404 IPR015940 -
Aev04g2360 565 ProSiteProfiles Ubiquitin-associated domain (UBA) profile. 365 405 IPR015940 -
Aev04g2360 565 SUPERFAMILY UBA-like 287 333 IPR009060 GO:0005515
Aev04g2360 565 PANTHER NEDD8 ULTIMATE BUSTER-1 BS4 PROTEIN 21 554 IPR039749 -
Aev04g2360 565 ProSiteProfiles Ubiquitin-associated domain (UBA) profile. 293 333 IPR015940 -
Aev04g2360 565 Gene3D - 295 334 - -
Aev04g2360 565 Gene3D - 370 405 - -
Aev04g2360 565 CDD UBA 371 400 - -
Aev04g2360 565 ProSiteProfiles Ubiquitin domain profile. 23 77 IPR000626 GO:0005515
Aev04g2360 565 Coils Coil 385 408 - -
Aev04g2360 565 SUPERFAMILY UBA-like 363 404 IPR009060 GO:0005515
Aev04g2360 565 MobiDBLite consensus disorder prediction 464 488 - -
Aev04g2360 565 MobiDBLite consensus disorder prediction 464 520 - -
Aev04g2360 565 MobiDBLite consensus disorder prediction 502 520 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g2360 Aev-Chr4 22839594 22844810 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g2360 - - aip:107630532 866.685