Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g2137 ATGATTTGGAGAAAAGGTGTGTTCAAGTTCTTCAATAATACCGCTTTAAGGTTGATTGCTGGGTTTAAAATTGGGAAGAGAAAGAAGCAAGTAGGAGAAACAATTGAAAATTGTGGAAATCAAAGCAACGTTGGAGATAAAATCCCCAAAGCATATGACAATGATGCTATGGTATTTATATCCATGTCTCAGGAGTTGAAGGATGAGGGGAACAAGTTGTTCCGAAAATGGGATATTGAGGGAGCTATGGTTAGATATGAAAAAGCCCTAAAATTGCTTCCTAGAAATCACATAGATGTGTCTCGCTTGCGAAGTAACATGGCTGCATGCTACATGCAGATGGGAGTCAGCGAGTACTCGAGGGCAATTCATGAATGTAATTTGGCTCTCGAAGTGACCCTTAAATACAGTAAAGCTCTGTTAAAAAGGGCAAGGTGTTATGAGGCTTTAAATAGGTTGGATTTAGCACTGAGAGATGTTAGTGTTGTTTTGAAGATGGAACCAAAAAATATCATGGCATTGGAGATCTCAGATAAGGTAAAGAAAAGACTTAGAAGAAGAAGAAGAAATAGAGCAACAAAGAGAAGGCAGAGGAATTCCAATAAAGTTGTAGAAAAGTATGCCGAGGAACCATTTCAGGAGAATAAAGTTGAGGACAGTTTTGAAATGAATAAGGTCGAGGACAGTATCGTACGGAAGAAGGATAACGAATCTGAAAAGAAGAAGACCAAGGAAAAAGTTGATGAGAAGAAGTATGATGTTAAGGAGAATGTTGAGGAAAACAGTAATGTTAGAAGAGAATATATACCTAAGAAATCGGCAAAACTTGTTTTTGGTGAGGATATTAGATGGGCTGAATTGCCTGTTAATTGTAGTTTCTATCAGCTGAGGGGAGTTATTTGTGGCAAGTTCCCTAGTATTGGAGCAGTTCTTATCAAATACAGAGACCAAGAAGAAGCTAATCCTGATCAGGATCCATTCTTTGCAAAACTGAATGTATATTTAGATTTTCACAAACTTGGGATGAAACTCTATTCTGAGGCGATCGAGGAGACTGTTACAAGTGAAGATGCACAAGGCCTGTTTGACATGGCTGGTGATAAGTTCCAAGAGATGGCAGCTCTAGCTTTGTTCAATTGGGGAAATGTGCATATGTCCCGGGCAAGGAAGAAAATGCATATCACCGAAGATTCTTCAAAACAACATATGCATGAACAAATTAAAAGTTCATATGAATGGGCACAGAAAGAATATAAAAAACTGGAGATAAATTTAGCAGCATGGCCCTCCACTAAGGTTCTTCAGCTTTACAACCATACTGAGGCTAACATGGAGAAAGGAATGCTGATATTGGAAGAATCGAAAGAGCAGCACTTGAGTAAAACCTATAATATGAATGATATTAGATTACATTTCCAGAAGACCGGGTTGGATGGGCTATTTTAA 1446 0.3824 MIWRKGVFKFFNNTALRLIAGFKIGKRKKQVGETIENCGNQSNVGDKIPKAYDNDAMVFISMSQELKDEGNKLFRKWDIEGAMVRYEKALKLLPRNHIDVSRLRSNMAACYMQMGVSEYSRAIHECNLALEVTLKYSKALLKRARCYEALNRLDLALRDVSVVLKMEPKNIMALEISDKVKKRLRRRRRNRATKRRQRNSNKVVEKYAEEPFQENKVEDSFEMNKVEDSIVRKKDNESEKKKTKEKVDEKKYDVKENVEENSNVRREYIPKKSAKLVFGEDIRWAELPVNCSFYQLRGVICGKFPSIGAVLIKYRDQEEANPDQDPFFAKLNVYLDFHKLGMKLYSEAIEETVTSEDAQGLFDMAGDKFQEMAALALFNWGNVHMSRARKKMHITEDSSKQHMHEQIKSSYEWAQKEYKKLEINLAAWPSTKVLQLYNHTEANMEKGMLILEESKEQHLSKTYNMNDIRLHFQKTGLDGLF* 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g2137 481 PANTHER PROTEIN CLMP1 332 420 IPR044517 -
Aev04g2137 481 PANTHER PROTEIN CLMP1 422 481 IPR044517 -
Aev04g2137 481 Gene3D Tetratricopeptide repeat domain 59 226 IPR011990 GO:0005515
Aev04g2137 481 ProSiteProfiles TPR repeat profile. 63 96 IPR019734 GO:0005515
Aev04g2137 481 SUPERFAMILY TPR-like 63 186 IPR011990 GO:0005515
Aev04g2137 481 PANTHER PROTEIN CLMP1 25 318 IPR044517 -
Aev04g2137 481 SUPERFAMILY CAD & PB1 domains 268 319 - -
Aev04g2137 481 ProSiteProfiles TPR repeat profile. 137 170 IPR019734 GO:0005515
Aev04g2137 481 PANTHER PROTEIN PHOX3 332 420 - -
Aev04g2137 481 SMART tpr_5 101 136 IPR019734 GO:0005515
Aev04g2137 481 SMART tpr_5 137 170 IPR019734 GO:0005515
Aev04g2137 481 SMART tpr_5 63 96 IPR019734 GO:0005515
Aev04g2137 481 Coils Coil 404 424 - -
Aev04g2137 481 PANTHER PROTEIN PHOX3 25 318 - -
Aev04g2137 481 MobiDBLite consensus disorder prediction 185 204 - -
Aev04g2137 481 PANTHER PROTEIN PHOX3 422 481 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g2137 Aev-Chr4 19434544 19436791 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev04g2137 46 170 Calmodulin-binding Proteins AT3G25230 30.147 2.35e-07 51.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g2137 - - gmx:100820306 528.865
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev01g2407 01 27871282 27873545 Aev04g2137 04 19434544 19436791 PCT